Table 1 List of genes with frequent somatic mutation and copy number variation in the HPVOPC patient.

From: Genetic Mutation and Exosome Signature of Human Papilloma Virus Associated Oropharyngeal Cancer

Gene

Chromosome

Position

Amino Acid Alteration

Type

Copy Number Variation

MUC16

Chr 19

8999446

S −> G

Missense

0

MUC16

Chr 19

8999479

Q −> K

Missense

0

MUC12

Chr 7

100612958

− −> A

Frameshift

0

MUC12

Chr 7

100637547

A −> T

Missense

0

MUC12

Chr 7

100641798

P −> A

Missense

0

MUC12

Chr 7

100643031

L −> I

Missense

0

MUC12

Chr 7

100646322

P −> T

Missense

0

MUC4

Chr 3

195508336

G −> D

Missense

3

MUC4

Chr 3

195508343

S −> T

Missense

3

MUC4

Chr 3

195508402

T −> N

Missense

3

MUC4

Chr 3

195509676

Q −> H

Missense

3

MUC4

Chr 3

195509717

P −> T

Missense

3

MUC4

Chr 3

195518101

D −> A

Missense

3

MUC4

Chr 3

195518103

P −> Q

Missense

3

MUC6

Chr 11

1016604

TV −> TP

Missense

3

MUC6

Chr 11

1016628

T −> I

Missense

3

MUC6

Chr 11

1016662

P −> S

Missense

3

MUC6

Chr 11

1016889

P −> S

Missense

3

MUC6

Chr 11

1017135

T −> I

Missense

3

MUC6

Chr 11

1017273

F −> S

Missense

3

MUC6

Chr 11

1017307

P −> S

Missense

3

MUC6

Chr 11

1017522

E −> A

Missense

3

MUC6

Chr 11

1017529

H −> Y

Missense

3

MUC6

Chr 11

1017912

T −> I

Missense

3

MUC6

Chr 11

1018459

P −> T

Missense

3

MUC2

Chr 11

1092715

A −> T

Missense

3

MUC2

Chr 11

1092928

S −> T

Missense

3

MUC2

Chr 11

1092941

T −> S

Missense

3

MUC2

Chr 11

1093057

T −> A

Missense

3

SIRPA

Chr 20

1895796

L −> S

Missense

3

SIRPA

Chr 20

1895950

DL −> ES

Missense

3

SIRPA

Chr 20

1896052

PD −> P

Frameshift

3

SIRPA

Chr 20

1896059

V −> T

Missense

3

HLA-DRB1

Chr 6

32548544

FI −> FL

Missense

0

HLA-DRB1

Chr 6

32551911

V −> G

Missense

0

HLA-DRB1

Chr 6

32551957

A −> K

Missense

0

HLA-DRB1

Chr 6

32552129

RE −> HE

Missense

0

HLA-A

Chr 6

29910716

Q −> G

Missense

0

HLA-B

Chr 6

31324200

S −> R

Missense

0

HLA-B

Chr 6

31324602

E −> M

Missense

0