Table 5 Enriched GO terms with variants less than 1% frequency across probands.

From: Next-generation DNA sequencing identifies novel gene variants and pathways involved in specific language impairment

Term

ExpCount

Count

P-value

FDR

ciliary or bacterial-type flagellar motility

3.63

12

8.33E-05

0.012

microtubule-based movement

20.46

37

0.000197

0.009

cell adhesion

125.70

160

0.000543

0.005

homophilic cell adhesion

18.71

33

0.000683

0.008

actin cytoskeleton organization

55.05

78

0.000777

0.004

extracellular matrix organization

46.57

65

0.002975

0.011

protein depolymerization

8.75

17

0.004587

0.001

cellular component assembly involved in morphogenesis

20.99

33

0.005049

0.003

dendrite development

17.23

28

0.005803

0.002

double-strand break repair via homologous recombination

6.99

14

0.007348

0.004

neuromuscular junction development

4.98

11

0.007624

0.005

actin polymerization or depolymerization

15.48

25

0.00954

0.006

cell projection organization

126.51

151

0.009759

0.000

  1. Pathways with P < 0.01 and size >10 genes are shown in the table. Those in bold are also found to be significantly enriched when considering a relaxed gene list over different variant frequencies, shown in Table 6.