Table 1 Number of differential Genes from reproductive leaf and root tissues in different models and interactions.

From: Reproductive stage physiological and transcriptional responses to salinity stress in reciprocal populations derived from tolerant (Horkuch) and susceptible (IR29) rice

Comparison

Fixed models/interactions

DEGS (n) in Leaf Samples (down/up regulated)

DEGs (n) in Root samples (down/up regulated)

Cross direction

IR29♀ vs Horkuch♀

↓664 ↑231

↓158 ↑131

Treatment

Stress vs Control

↓802 ↑1399

↓665 ↑816

Phenotype

Tolerant vs Sensitive

↓21 ↑9

↓9 ↑11

Cross direction × Treatment

Horkuch♀ Stress vs Horkuch♀ Control

↓733 ↑997

↓435 ↑600

 

IR29♀ Stress vs IR29♀ Control

↓271 ↑644

↓267 ↑259

Phenotype × Treatment

Sensitive Stress vs Sensitive Control

↓228 ↑428

↓185 ↑278

 

Tolerant Stress vs Tolerant Control

↓139 ↑272

↓173 ↑193