Table 2 Consensus QTLs for SOC and SPC identified by a high-density linkage map of the KNDH population.

From: Genetic dissection of seed oil and protein content and identification of networks associated with oil content in Brassica napus

Trait

Consensus QTL

Chromosome

Peak

Range

LOD

Additive

PV (%)

Environment

SOC

cqOC-A1

A01

109.41

104.00–112.10

4.32047

0.7173

9.59

08DL

cqOC-A2–1

A02

2.30

0–7.08

2.06–2.34

−0.41– −0.43

1.97–2.22

10DL/11DL

cqOC-A2-2

A02

107.71

105.80–109.20

7.69916

−1.2

14.18

11GS

cqOC-A2–3

A02

116.26

113.42–119.10

2.30–7.35

−0.66– −1.16

3.43–13.72

11GS/10GS/13WH

cqOC-A3-1

A03

26.01

23.58–28.43

2.13–3.37

−0.52– −0.68

4.36–6.00

10GS/11GS

cqOC-A3-2

A03

32.51

31.9–35.8

3.38086

−0.68

6.02

11GS

cqOC-A3-3

A03

122.37

120.45–124.29

2.28–3.50

0.35–0.50

2.12–3.13

09DL/11DL/12DL

cqOC-A3-4

A03

151.81

150.70–153.90

3.65862

0.5785

3.44

11DL

cqOC-A3-5

A03

182.85

182.10–183.59

2.14–2.45

0.37–0.49

1.94–2.41

11DL/12DL

cqOC-A3-6

A03

191.71

183.20–195.70

3.71721

0.6261

4.12

11DL

cqOC-A3-7

A03

204.14

200.26–208.03

2.14–3.59

0.38–0.73

2.08–3.76

11DL/12DL/13WH/12DL

cqOC-A8-1

A08

1.47

1.08–1.85

2.40–3.48

0.40–0.50

2.16–3.25

12DL/10DL

cqOC-A8-2

A08

8.61

7.34–9.88

2.331–5.32

0.38–0.62

2.45–5.32

10GS/09DL/13DL/10DL/12DL

cqOC-A8-3

A08

12.32

10.85–13.78

2.60–3.72

0.58–0.72

3.50–6.82

11GS/11DL/10GS

cqOC-A8-4

A08

18.01

17.61–18.41

3.45–5.12

0.47–0.85

3.09–9.36

12DL/10DL/11GS/13DL

cqOC-A8-5

A08

20.01

19.53–20.49

2.84–4.83

0.37–0.67

2.62–5.89

10HG/09DL

cqOC-A8-6

A08

21.91

20.9–23.2

3.19–5.34

0.59–0.86

3.90–9.76

12WH/11GS

cqOC-A9-1

A09

1.17

0.19–2.14

2.04–2.69

0.36–0.47

2.14–2.52

10DL/09DL/10HG

cqOC-A9–2

A09

23.27

21.81–24.73

2.19–4.38

0.42–0.57

2.54–4.18

09DL/10DL/10HG/13DL

cqOC-A9-3

A09

31.21

30.4–32.2

4.2098

0.532

3.88

13DL

cqOC-A9-4

A09

34.26

32.36–36.17

2.45–5.35

0.41–0.72

2.30–5.40

11DL/10DL/09DL

cqOC-A9-5

A09

67.61

67.1–73.1

3.22245

−0.56

3.04

11DL

cqOC-A9-6

A09

95.11

94.9–96.7

4.50709

0.5957

4.82

12DL

cqOC-A9-7

A09

98.41

97.23–99.58

2.96–4.80

0.49–0.68

3.06–5.14

10DL/12WH

cqOC-A9-8

A09

100.71

99.9–101.2

9.18561

0.8578

10.05

13DL

cqOC-A9-9

A09

106.28

105.79–106.77

2.76–14.19

0.64–1.05

4.88–14.94

09DL/11GS/13DL/12DL/12WH/10GS

cqOC-A9-10

A09

112.7

111.62–113.79

2.87–11.48

0.69–0.81

3.32–12.41

09DL/11DL/12WH/13WH

cqOC-A9-11

A09

116.38

116.16–116.59

7.33–7.66

0.64–0.79

7.76–8.46

13DL/09DL

cqOC-A9-12

A09

122.01

119.88–124.13

2.60–7.21

0.66–0.89

7.25–8.05

10GS/11DL

cqOC-A10-1

A10

1.11

0–2.59

3.64–3.79

−0.61– −0.64

3.39–4.56

10DL/09DL

cqOC-A10-2

A10

8.71

5.8–16.7

2.80147

−0.68

2.73

11DL

cqOC-A10-3

A10

18.03

14.35–21.71

2.12–3.13

−0.56– −1.02

2.00–4.43

11WH/10DL/12DL

cqOC-C2-1

C02

84.14

82.1–86.18

2.60–3.66

0.47–0.82

2.44–8.68

10DL/10GS

cqOC-C2–2

C02

91.10

89.17–93.04

2.95–3.13

0.49–0.76

2.76–7.48

10DL/10GS

cqOC-C2-3

C02

100.71

97.6–103.1

3.69768

0.5657

3.90

10DL

cqOC-C2-4

C02

111.08

109.45–112.72

3.72–2.10

0.33–0.53

1.95–3.50

10DL/09DL

cqOC-C3-1

C03

144.94

142.23–147.64

2.26–2.74

0.37–0.4417

2.56–2.20

12WH/09DL

cqOC-C3–2

C03

166.11

163.56–168.65

2.35–5.26

0.48–0.90

2.24–12.72

10GS/11DL

cqOC-C3-3

C03

172.61

171.6–173.9

4.08611

0.8218

10.25

10GS

cqOC-C3–4

C03

300.48

299.84–301.12

2.69–8.04

0.45–1.052

2.52–8.12

11WH/10HG/12DL/09DL/10DL/11DL/13DL/13WH

cqOC-C3-5

C03

309.01

308.17–309.86

3.08–8.01

0.56–0.78

3.84–8.03

10HG/09DL/13DL

cqOC-C3-6

C03

312.33

311.35–313.31

3.44–7.86

0.51–1.20

3.21–9.32

10DL/13WH/12DL/12WH

cqOC-C3-7

C03

318.41

314.17–322.64

4.59–6.23

0.60–1.09

4.92–7.86

12DL/13DL/13WH

cqOC-C5-1

C05

71.99

58.2–85.8

5.66153

0.9311

10.86

10HG

cqOC-C5-2

C05

135.39

123.4–136

3.82137

−0.5302

3.57

10DL

cqOC-C5-3

C05

183.19

181.38–184.99

2.35–10.20

0.45–1.00

2.86–10.71

09DL/11DL/11WH

cqOC-C5-4

C05

191.08

190.1–192.06

2.17–10.64

0.37–1.02

2.09–11.11

11DL/09DL/12WH

cqOC-C5-5

C05

220.41

219.85–220.98

3.83–7.55

0.47–0.77

3.90–7.64

09DL/10DL/11DL/12DL/12WH

cqOC-C5-6

C05

230.24

229.22–231.26

2.42–7.33

0.54–0.76

2.3–7.43

12WH/09DL/10DL/12DL

cqOC-C5-7

C05

234.02

232.79–235.24

2.42–7.33

0.50–0.75

2.36–7.43

10DL/11DL

cqOC-C5-8

C05

237.39

234.66–240.11

3.46–4.34

0.53–0.89

3.87–5.64

13DL/13WH

cqOC-C5-9

C05

250.78

249.56–252.01

4.02–4.37

0.53–0.85

3.91–5.03

13DL/13WH

cqOC-C5-10

C05

258.99

257.20–259.40

4.20546

0.9034

5.68

11WH

cqOC-C6-1

C06

23.98

15.25–32.72

2.66–3.26

0.47–0.85

2.80–5.03

11WH/13DL

cqOC-C6-2

C06

149.34

147.65–151.02

2.29–4.44

0.50–0.83

2.79–4.32

10HG/13DL/13WH

cqOC-C6-3

C06

159.20

152.6–162.4

2.03–3.72

0.73–1.48

3.01–3.67

13DL/12DL/13WH

cqOC-C6-4

C06

160.61

155.2–169.8

3.61–4.08

0.60–0.68

3.73–4.53

10HG/13DL

cqOC-C6-5

C06

181.81

180.18–183.45

2.98–4.35

0.52–0.75

2.75–4.58

13DL/10DL/11DL

cqOC-C6-6

C06

188.71

187.58–188.96

2.39–13.53

0.37–4.85

3.78–22.24

12DL/10GS/09DL/10DL/11DL/13DL

cqOC-C6-7

C06

195.61

195.2–197

5.41

0.80

5.65

11DL

cqOC-C6-8

C06

199.11

198.88–199.33

5.972–6.45

−2.052–2.12

6.17–6.24

10DL/12DL

cqOC-C6-9

C06

201.31

200.4–202.3

3.98846

0.5657

3.64

13DL

cqOC-C6-10

C06

203.8

203.56–204.05

3.62–4.98

−1.99–2.06

3.42–4.88

11DL/12DL

cqOC-C6-11

C06

207.51

206.5–211.6

3.46766

0.5242

3.18

13DL

cqOC-C8

C08

66.15

62.66–69.65

2.03–3.75

0.40–0.79

1.92–9.55

10GS/10DL

cqOC-C9-1

C09

7.39

4.08–10.7

2.01–6.41

0.45–0.68

1.98–6.49

12WH/10DL/11DL/12DL/09DL

cqOC-C9-2

C09

27.11

24.6–29.8

3.80835

0.5388

3.70

13DL

SPC

cqPC-A2

A02

0.01

0–1.13

2.91–4.83

0.25–0.47

3.42–10.09

11GS/12DL

cqPC-A3-1

A03

127.01

124.80–127.70

3.46

−0.34

4.23

11WH

cqPC-A3-2

A03

131.81

131.30–132.30

8.7

−2.12

27.48

10GS

cqPC-A3-3

A03

135.51

133.00–139.90

4.64

−0.4

5.68

11WH

cqPC-A3-4

A03

203.51

200.58–206.43

2.11–7.24

−0.22–0.58

2.65–7.75

12DL/13DL/13WH

cqPC-A3-5

A03

216.61

214.60–216.90

6.64

1.95

20.53

10GS

cqPC-A4-1

A04

14.59

13.00–15.50

3.74

−0.44

7.65

11GS

cqPC-A4-2

A04

55.29

52.50–56.40

4.7

−0.53

6.19

12WH

cqPC-A7

A07

97.71

95.80–100.90

4

−1.01

4.89

09DL

cqPC-A9-1

A09

1.17

0–5.36

2.10–4.42

−0.27–0.32

2.53–5.23

10DL/12DL

cqPC-A9-2

A09

16.4

13.47–19.32

2.93–4.15

−0.31–0.53

3.82–5.39

12WH/10HG/11DL

cqPC-A9-3

A09

23.89

20.59–27.18

2.14–4.20

−0.26–0.53

2.57–5.44

10DL/11DL

cqPC-A9-4

A09

32.01

31.20–33.40

4.42

−0.38

5.34

11WH

cqPC-A9-5

A09

37.31

33.4–42.21

3.04–4.42

−0.22–0.38

3.01–5.34

11WH/13DL

cqPC-C1-1

C01

93.79

93.05–94.53

2.20–4.58

−0.19–0.39

2.18–5.86

13DL/10DL

cqPC-C1-2

C01

152.19

150.05–154.33

4.02–8.22

0.38–1.66

5.20–10.36

10HG/09DL/13WH

cqPC-C1-3

C01

159.36

158.0 0−160.72

7.80–4.88

0.96–1.59

6.26–9.86

09DL/13WH

cqPC-C1-4

C01

168.01

166.00–176.90

3.67

0.85

4.78

13WH

cqPC-C3-1

C03

287.81

287.50–288.40

3.44

−0.35

4.48

11WH

cqPC-C3-2

C03

298.77

297.38–300.15

7.08–8.27

−0.39–0.49

8.74–8.92

11WH/13DL

cqPC-C3-3

C03

303.72

302.84–304.59

3.767–8.02

−0.35–0.53

4.82–9.82

10HG/11WH

cqPC-C3-4

C03

312.51

310.1–319.9

3.47

−0.34

4.47

10HG

cqPC-C5-1

C05

133.89

121.3–136

4.42

1.37

5.61

10DL

cqPC-C5-2

C05

141.96

139.89–144.03

4.22–5.33

−0.25–0.32

5.42–6.64

10DL/09DL

cqPC-C5-3

C05

225.49

221.80–225.90

5

−0.38

6.55

11DL

cqPC-C5-4

C05

231.59

231.20–233.90

3.63

−0.41

4.78

11DL

cqPC-C5-5

C05

237.39

234.67–240.1

2.48–4.50

−0.29–0.6

5.86–3.34

10DL/12DL/13DL

cqPC-C5-6

C05

252.21

251.54–252.89

2.20–7.91

−0.24–0.88

2.91–8.51

10DL/12DL/13WH/13DL

cqPC-C5-7

C05

260.81

260.26–261.37

2.68–5.72

0.38–1.7758

3.41–6.25

12DL/13DL/13WH

cqPC-C6-1

C06

54.45

50.31–58.58

2.08–3.17

−0.27–0.29

2.39–4.03

12DL/11WH

cqPC-C6-2

C06

149.41

145.01–153.8

2.53–4.39

−0.24–0.42

2.87–5.59

10DL/12DL

cqPC-C6-3

C06

156.6

153.85–159.35

2.28–3.24

−0.34–0.37

4.31–5.84

10GS/10DL

cqPC-C7

C07

109.84

105.01–114.66

2.21–4.77

−0.28–0.32

2.78–5.68

12DL/11WH

cqPC-C8

C08

15.39

11.3–16.7

4.41

0.28

4.62

13DL

cqPC-C9-1

C09

2

0.0–6.7

2.23

−0.28–0.35

2.86–4.45

12WH/10DL

cqPC-C9-2

C09

8.12

6.47–9.78

2.055–2.98

−0.32–0.34

3.88–4.18

12WH/11GS

cqPC-C9-3

C09

70.54

69.35–71.72

2.31–3.09

−0.23–0.603

2.92–3.22

13DL/13WH

cqPC-C9-4

C09

77.31

74.86–79.75

2.41–2.60

−0.2–0.64

2.51–3.28

13DL/13WH