Table 1 Validated mutations in K150/B150 of experimental evolution.
Species | Gene | Gene function | Mutation | Genome position/bp | Substitution |
---|---|---|---|---|---|
K150 | ffh | signal recognition particle protein | C → T | 201775 | V → M |
KVH_05035 | creatinine amidohydrolase | T → C | 1003977 | I → M | |
hipO | amidohydrolase | G → A | 1443879 | G → S | |
KVH_08735 | NADPH nitroreductase | A → C | 1743506 | S → A | |
dksA | RNA polymerase-binding protein DksA | G → A | 2006178 | R → C | |
B150 | BtBc_02850 | epimerase | C → T | 550413 | W → U |
BtBc_03145 | chemotaxis protein | A → G | 602604 | Q → R | |
treR | trehalose operon repressor | A → G | 692130 | Q → R | |
yfnA | amino acid permease | C → T | 917190 | C → Y | |
BtBc_04905 | MarR family transcriptional regulator | G → A | 932415 | T → I | |
BtBc_08920 | hypothetical protein | C → T | 1691716 | M → I | |
BtBc_08990 | glycosyltransferase | A → G | 1703700 | T → A | |
BtBc_12015 | TetR family transcriptional regulator | A → G | 2307900 | M → T | |
azr | NADPH-dependent FMN reductase | C → T | 2370384 | P → S | |
lsrB | autoinducer 2-binding protein lsrB | T → A | 2890716 | S → T | |
hutH | histidine ammonia-lyase | C → T | 3779434 | A → T | |
polC | PolC-type DNA polymerase III | T → C | 3942021 | K → E | |
greA | transcription elongation factor GreA | T → C | 4475438 | E → G | |
hemA | glutamyl-tRNA reductase | T → C | 4563120 | H → R | |
BtBc_24035 | histone deacetylase | G → A | 4743005 | R → Q | |
mviM | virulence factor MviM | A → G | 4759919 | Q → R | |
ftsK | cell division protein FtsK | C → T | 4773874 | V → I | |
BtBc_26105 | serine/threonine protein kinase | G → A | 5114831 | A → V | |
BtBc_27510 | glycosyl transferase | C → T | 5387774 | W → U | |
rho | transcription termination factor Rho | G → A | 5448060 | P → L | |
BtBc_27985 | LPXTG-domain-containing protein cell wall anchor domain | C → G | 5485786 | A → G | |
BtBc_28330 | glycosyl transferase family | T → C | 5557300 | S → P | |
BtBc_30195 | hypothetical protein | Delete T | 1655 | shift | |
BtBc_30200 | hypothetical protein | Insert A | 2920 | shift | |
BtBc_08255 | ribosomal protein L5 domain protein | Delete A | 1568624 | shift | |
BtBc_08685 | uracil-DNA glycosylase | Delete A | 1648698 | shift | |
BtBc_09325 | motility repressor MogR | Delete A | 1775506 | shift | |
BtBc_12210 | molecular chaperone Hsp20 | Delete T | 2343900 | shift | |
bacF | non-ribosomal peptide synthetase | Delete A | 2446926 | shift | |
BtBc_16740 | S-adenosylhomocysteine nucleosidase | Delete T | 3298277 | shift | |
BtBc_18345 | Lsa family ABC-F type ribosomal protection protein | Insert AT | 3629982 | shift | |
BtBc_18600 | spore germination protein | Insert A | 3689846 | shift |