Table 1 Details of CNVs identified in the array-based sample

From: Increased de novo copy number variants in the offspring of older males

CNV number

CNV1

CNV2

CNV3

CNV4

CNV5

CNV6

CNV7

Array

B

A

A

B

A

B

A

B

A

A

Total number of probes

15

35

25

32

76

1172

33

428

12

8

Size (bp)

2 025 740

252 355

3 164 549

2 543 203

506 199

428 532

211 341

157 741

85 722

198 616

Genomic coordinates

Chr4qA5 41.6–43.6 Mb

Chr5qG2 132.5–132.7 Mb

Chr7qA3 21.0–24.1 Mb

Chr14qA3 26.7–27.2 Mb

Chr14qD2 69.9–70.1 Mb

ChrXqF5 166.3–166.4 Mb

ChrXqF5 166.4–166.6 Mb

Genes

Cntfr, Dctn3, Arid3c, Sigmar1, Galt, Il11ra1, Il11ra2, Ccl27a, Ccl27b, Ccl19, Ccl21a, Ccl21b, Ccl21c, Dnajb5, Fancg, Pigo, Stoml2, Unc13b, Atp8b5, Vcp, Rusc2, Fam166b, Tesk1, Cd72, Sit1, Rmrp, Ccdc107, Car9, Tpm2, Tln1, Creb3, Gba2, Rgp1, Msmp,1700022I11Rik, 2810432D09Rik, 4933409K07Rik, B230312A22Rik, BC049635, E130306D19Rik, N28178

Auts2

EG667283, Nlrp4e, Vmn1r gene family

Anxa11, Plac9, D14Ertd449e, Cphx, Duxbl

Slc25a37, D930020E02Rik, Entpd4, Loxl2

Mid1

Mid1

  1. Abbreviation: CNV, copy number variant.
  2. CNVs were detected using a (A) commercial, genome-wide aCGH array and/or (B) a targeted, custom CNV array, pending on suitable probes being present. The total number of probes supporting each CNV, its estimated size and genomic location are listed together with the genes that were either contained or affected by the CN.
Back to article page