Figure 1

The Manhattan plot depicts the −log10p for the F-statistic corresponding to the portion of variation of expression explained by copy number variation (CNV) state in the analysis of covariance (ANCOVA) in the reduced data set after the filters (N=574). The chromosomes are shaded alternately and each expression probe is represented by a dot. Probes with P<0.001 were considered for a case–control association study (red).