Table 1 CORT-mediated (50 mg kg−1, 21 days s.c.), altered miRNAs in rat prefrontal cortex and their characteristics

From: Chronic corticosterone-mediated dysregulation of microRNA network in prefrontal cortex of rats: relevance to depression pathophysiology

miRNAs

Accession no.

Fold change

P-value

Regulation

Chromosomal location (Rat)

Seed sequence

Transcriptional unit

miR-19b

MIMAT0000788

1.284078291

0.015148

chr15: 103641487-103641573 [+]

chrX: 140167226-140167321 [−]

5′-GUGCAAA-3′

Intergenic, intergenic

miR-29c

MIMAT0000803

1.565815431

0.004636

chr1: 39612916-39613003 [+]

chr13: 118329978-118330065 [+]

5′-AGCACCA-3′

Exonic, exonic

miR-101a

MIMAT0000823

1.594450158

0.028947

chr5: 124050126-124050200 [−]

5′-ACAGUAC-3′

Exonic

miR-124

MIMAT0000828

1.768260098

0.000853

chr3: 180116126-180116212 [+]

chr15: 51712751-51712835 [+]

chr2: 122049028-122049136 [+]

5′-AAGGCAC-3′

Intergenic, intergenic, intergenic

miR-137

MIMAT0000843

1.394684534

0.009357

chr2: 239707763-239707864 [+]

5′-UAUUGCU-3′

Intergenic

miR-153

MIMAT0000855

2.328177683

0.015395

chr6: 154028732-154028818 [+]

5′-UGCAUAG-3′

Intronic

miR-181a

MIMAT0000858

1.443247107

0.034332

chr3: 28374769-28374885 [+]

chr13: 59986075-59986174 [+]

5′-ACAUUCA-3′

Intronic, exonic

miR-181c

MIMAT0000857

1.731680672

0.012072

chr19: 36267311-36267416 [−]

5′-ACAUUCA-3′

Intergenic

miR-203

MIMAT0000876

1.39812046

0.033212

chr6: 145714633-145714729 [+]

5′-UGAAAUG-3′

Exonic

miR-218

MIMAT0000888

1.285324379

0.000235

chr10: 20303158-20303267 [+]

chr14: 66955494-66955603 [−]

5′-UGUGCUU-3′

Intronic, exonic, intronic

miR-324-5p

MIMAT0000553

1.412569727

0.049794

chr10: 56366245-56366327 [+]

5′-GCAUCCC-3′

Exonic, intronic

miR-365

MIMAT0001549

1.279026214

0.035465

chr10: 64570072-64570157 [−]

5′-AAUGCCC-3′

Intergenic

miR-409-5p

MIMAT0003204

1.497710118

0.047871

chr6: 143055776-143055852 [+]

5′-GGUUACC-3′

Exonic

miR-582-5p

MIMAT0012833

1.810050564

0.008875

chr2: 59928607-59928687 [+]

5′-UACAGUU-3′

Intronic

miR-29a

MIMAT0000802

1.594299491

0.003691

chr4: 58099674-58099761 [−]

5′-AGCACCA-3′

Exonic

miR-30e

MIMAT0000805

1.380416302

0.02323

chr5: 143497752-143497843 [−]

5′-GUAAACA-3′

Intronic

miR-721

No report

1.691847218

0.037392

Not reported

5′-AGUGCAA-3′

Not reported

miR-699

No report

2.007193854

0.008792

Not reported

Not reported

Not reported

miR-146a

MIMAT0000852

0.603748944

0.006804

chr10: 28806739-28806833 [−]

5′-GAGAACU-3′

Intergenic

miR-200c

MIMAT0000873

0.114793637

0.016703

chr4: 224254382-224254450 [−]

5′-AAUACUG-3′

Exonic

miR-351

MIMAT0000608

0.654310843

0.025434

chrX: 152774513-152774593 [+]

chrX: 153212230-153212310 [+]

5′-CCCUGAG-3′

Intergenic, intergenic

miR-155

MIMAT0030409

0.526008585

0.020242

chr11: 27810358-27810422 [+]

5′-UAAUGCU-3′

Intergenic

miR-678

MIMAT0012857

0.679476805

0.038127

chr20: 15366762-15366844 [+]

5′-UCUCGGG-3′

Exonic

miR-764-5p

MIMAT0012854

0.66665086

0.032063

chrX: 118264668-118264775 [+]

5′-GUGCUCA-3′

Intergenic

miR-135a-3p

MIMAT0004732

0.738454042

0.02441

chr7: 32974076-32974175 [−]

5′-AUGGCUU-3′

Intergenic

  1. Abbreviations: CORT, corticosterone; miR, microRNA.