Table 1 CORT-mediated (50 mg kg−1, 21 days s.c.), altered miRNAs in rat prefrontal cortex and their characteristics
miRNAs | Accession no. | Fold change | P-value | Regulation | Chromosomal location (Rat) | Seed sequence | Transcriptional unit |
---|---|---|---|---|---|---|---|
miR-19b | MIMAT0000788 | 1.284078291 | 0.015148 | ↑ | chr15: 103641487-103641573 [+] chrX: 140167226-140167321 [−] | 5′-GUGCAAA-3′ | Intergenic, intergenic |
miR-29c | MIMAT0000803 | 1.565815431 | 0.004636 | ↑ | chr1: 39612916-39613003 [+] chr13: 118329978-118330065 [+] | 5′-AGCACCA-3′ | Exonic, exonic |
miR-101a | MIMAT0000823 | 1.594450158 | 0.028947 | ↑ | chr5: 124050126-124050200 [−] | 5′-ACAGUAC-3′ | Exonic |
miR-124 | MIMAT0000828 | 1.768260098 | 0.000853 | ↑ | chr3: 180116126-180116212 [+] chr15: 51712751-51712835 [+] chr2: 122049028-122049136 [+] | 5′-AAGGCAC-3′ | Intergenic, intergenic, intergenic |
miR-137 | MIMAT0000843 | 1.394684534 | 0.009357 | ↑ | chr2: 239707763-239707864 [+] | 5′-UAUUGCU-3′ | Intergenic |
miR-153 | MIMAT0000855 | 2.328177683 | 0.015395 | ↑ | chr6: 154028732-154028818 [+] | 5′-UGCAUAG-3′ | Intronic |
miR-181a | MIMAT0000858 | 1.443247107 | 0.034332 | ↑ | chr3: 28374769-28374885 [+] chr13: 59986075-59986174 [+] | 5′-ACAUUCA-3′ | Intronic, exonic |
miR-181c | MIMAT0000857 | 1.731680672 | 0.012072 | ↑ | chr19: 36267311-36267416 [−] | 5′-ACAUUCA-3′ | Intergenic |
miR-203 | MIMAT0000876 | 1.39812046 | 0.033212 | ↑ | chr6: 145714633-145714729 [+] | 5′-UGAAAUG-3′ | Exonic |
miR-218 | MIMAT0000888 | 1.285324379 | 0.000235 | ↑ | chr10: 20303158-20303267 [+] chr14: 66955494-66955603 [−] | 5′-UGUGCUU-3′ | Intronic, exonic, intronic |
miR-324-5p | MIMAT0000553 | 1.412569727 | 0.049794 | ↑ | chr10: 56366245-56366327 [+] | 5′-GCAUCCC-3′ | Exonic, intronic |
miR-365 | MIMAT0001549 | 1.279026214 | 0.035465 | ↑ | chr10: 64570072-64570157 [−] | 5′-AAUGCCC-3′ | Intergenic |
miR-409-5p | MIMAT0003204 | 1.497710118 | 0.047871 | ↑ | chr6: 143055776-143055852 [+] | 5′-GGUUACC-3′ | Exonic |
miR-582-5p | MIMAT0012833 | 1.810050564 | 0.008875 | ↑ | chr2: 59928607-59928687 [+] | 5′-UACAGUU-3′ | Intronic |
miR-29a | MIMAT0000802 | 1.594299491 | 0.003691 | ↑ | chr4: 58099674-58099761 [−] | 5′-AGCACCA-3′ | Exonic |
miR-30e | MIMAT0000805 | 1.380416302 | 0.02323 | ↑ | chr5: 143497752-143497843 [−] | 5′-GUAAACA-3′ | Intronic |
miR-721 | No report | 1.691847218 | 0.037392 | ↑ | Not reported | 5′-AGUGCAA-3′ | Not reported |
miR-699 | No report | 2.007193854 | 0.008792 | ↑ | Not reported | Not reported | Not reported |
miR-146a | MIMAT0000852 | 0.603748944 | 0.006804 | ↓ | chr10: 28806739-28806833 [−] | 5′-GAGAACU-3′ | Intergenic |
miR-200c | MIMAT0000873 | 0.114793637 | 0.016703 | ↓ | chr4: 224254382-224254450 [−] | 5′-AAUACUG-3′ | Exonic |
miR-351 | MIMAT0000608 | 0.654310843 | 0.025434 | ↓ | chrX: 152774513-152774593 [+] chrX: 153212230-153212310 [+] | 5′-CCCUGAG-3′ | Intergenic, intergenic |
miR-155 | MIMAT0030409 | 0.526008585 | 0.020242 | ↓ | chr11: 27810358-27810422 [+] | 5′-UAAUGCU-3′ | Intergenic |
miR-678 | MIMAT0012857 | 0.679476805 | 0.038127 | ↓ | chr20: 15366762-15366844 [+] | 5′-UCUCGGG-3′ | Exonic |
miR-764-5p | MIMAT0012854 | 0.66665086 | 0.032063 | ↓ | chrX: 118264668-118264775 [+] | 5′-GUGCUCA-3′ | Intergenic |
miR-135a-3p | MIMAT0004732 | 0.738454042 | 0.02441 | ↓ | chr7: 32974076-32974175 [−] | 5′-AUGGCUU-3′ | Intergenic |