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Volume 22 Issue 10, October 2021

Inspired by the Review on p627.

Cover design: Patrick Morgan.

Comment

  • In this Comment, Balogun and Olopade highlight opportunities and initiatives for incorporating genomics into cancer management to promote health equity.

    • Onyinye D. Balogun
    • Olufunmilayo I. Olopade
    Comment

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Research Highlights

  • A new study in Nature reports a large-scale genome-wide association study of menopause timing, revealing mechanistic details and potential therapeutic opportunities for preserving human fertility.

    • Darren J. Burgess
    Research Highlight
  • A new report introduces xPore, a computational method and statistical framework for the analysis of differential RNA modifications from nanopore direct RNA sequencing data.

    • Linda Koch
    In Brief
  • A recent study analysing UK Biobank data provides a systematic resource of shared genetic predispositions to co-existing common diseases.

    • Linda Koch
    In Brief
  • A study in Current Biology reports the retrieval of genome-scale information for human, wolf (Canis lupus) and bison (Bison bonasus) by shotgun sequencing and genomic analysis of a sediment sample.

    • Linda Koch
    In Brief
  • Juliusdottir et al. use pedigree data to dissect the contributions of parental and fetal genomes to fetal growth and adult disease.

    • Joseph Willson
    Research Highlight
  • Attempts to understand the role of aneuploidy in tumorigenesis have been hampered by conflicting results. Now, two new mouse models described in Genes and Development provide evidence that chromosome instability-induced aneuploidy drives T cell lymphomagenesis.

    • Dorothy Clyde
    Research Highlight
  • A recent study has analysed publicly available long-read sequencing data to characterize human-specific variable number tandem repeats at high resolution.

    • Linda Koch
    In Brief
  • Kim et al. present a drosophilid genome resource comprising 101 de novo genome assemblies from 93 drosophilid species obtained by nanopore sequencing.

    • Linda Koch
    In Brief
  • A new method called CIM-seq analyses pairwise co-occurrences of cell types across multiplets to identify cells that are in physical contact with each other in intact tissues.

    • Linda Koch
    In Brief
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Reviews

  • Combining single-cell RNA sequencing (scRNA-seq) and spatial transcriptomics can localize transcriptionally characterized single cells within their native tissue context. This Review discusses methodologies and tools to integrate scRNA-seq with spatial transcriptomics approaches, and illustrates the types of insights that can be gained.

    • Sophia K. Longo
    • Margaret G. Guo
    • Paul A. Khavari
    Review Article
  • McLaren and Fellay review our current understanding of the effects of human genetic variation on HIV infection and disease progression and how this knowledge is contributing to preventative and therapeutic approaches.

    • Paul J. McLaren
    • Jacques Fellay
    Review Article
  • Genome-wide association studies (GWAS) have revealed important biological insights into complex diseases. The authors review approaches that leverage GWAS to identify opportunities for repurposing existing drugs, including single-loci mapping to drug targets, transcriptome-wide association studies, gene-set association, causal inference by Mendelian randomization and polygenic scoring.

    • William R. Reay
    • Murray J. Cairns
    Review Article
  • Genome-scale sequencing data have revealed statistical properties of mutagenesis in humans. Statistical analyses that interpret these patterns and incorporate knowledge on DNA replication and repair pathways can provide mechanistic models that shed light on the origin of spontaneous human mutation in the germ line.

    • Vladimir B. Seplyarskiy
    • Shamil Sunyaev

    Collection:

    Review Article
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Amendments & Corrections

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