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Showing 1–50 of 1124 results
Advanced filters: Author: Daniel M Lewis Clear advanced filters
  • Genome-wide association meta-analysis identifies 58 independent risk loci for major anxiety disorders among individuals of European ancestry and implicates GABAergic signaling as a potential mechanism underlying genetic risk for these disorders.

    • Nora I. Strom
    • Brad Verhulst
    • John M. Hettema
    ResearchOpen Access
    Nature Genetics
    Volume: 58, P: 275-288
  • Although Tc toxins are a major class of bacterial toxin translocation systems, little is known about their receptor binding. Here, the authors identify heparins/heparan sulfates and Lewis antigens as receptors for different Tc toxins, determine cryo-EM structures of three toxin-glycan complexes and propose a two-step cell adhesion mechanism for Tc toxins.

    • Daniel Roderer
    • Felix Bröcker
    • Stefan Raunser
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • The synthesis of unprotected C-heteroaryl glycosides is challenging because of the lack of methods to utilize native saccharides as substrates. Now these compounds, capped as redox-active glycosyl sulfide donors, undergo C–C coupling with N-heteroarenes through a photoinduced, thiyl radical-mediated reaction with control over the chemo-, site- and stereoselectivity.

    • Qian-Yi Zhou
    • Daniel Zhi Wei Ng
    • Ming Joo Koh
    Research
    Nature Synthesis
    P: 1-11
  • Analysis combining multiple global tree databases reveals that whether a location is invaded by non-native tree species depends on anthropogenic factors, but the severity of the invasion depends on the native species diversity.

    • Camille S. Delavaux
    • Thomas W. Crowther
    • Daniel S. Maynard
    ResearchOpen Access
    Nature
    Volume: 621, P: 773-781
  • Thermal imaging lenses are typically made from expensive materials such as germanium and silicon. Here, the authors synthesise a sulfur-based polymer with high mid-wave infrared and long-wave infrared transparencies, presenting a high-performing, low-cost alternative to traditional thermal imaging lens materials.

    • Samuel J. Tonkin
    • Harshal D. Patel
    • Justin M. Chalker
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-8
  • Post-translational site-selective formation of boronoalanine in proteins enables applications of boron for binding partner capture, footprinting of interactions with reactive oxygen species, proteolytic control and mapping of transient structures.

    • Tim A. Mollner
    • Patrick G. Isenegger
    • Benjamin G. Davis
    ResearchOpen Access
    Nature Chemical Biology
    Volume: 17, P: 1245-1261
  • Exploration of the chemistry of allylic, benzylic, propargylic and allenylic oxonium ions is lacking despite the latest developments in onium ion chemistry. Now, a unified approach for the synthesis and NMR spectroscopic characterization of these unusual species is reported, helping to understand their reactivity.

    • Hau Sun Sam Chan
    • Yingzi Li
    • Jonathan W. Burton
    Research
    Nature Synthesis
    P: 1-12
  • Quantifying ecosystem dynamics is critical in the face of rapid environmental change. This study uses airborne eDNA to quantify changes in organism abundances across the tree of life and reveal a regional decline in biodiversity over three decades.

    • Alexis R. Sullivan
    • Edvin Karlsson
    • Per Stenberg
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Climate change can alter when and how animals grow, breed, and migrate, but it is unclear whether this allows populations to persist. This global study shows that shifts in seasonal timing are key to helping vertebrate species maintain population growth under global warming.

    • Viktoriia Radchuk
    • Carys V. Jones
    • Martijn van de Pol
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • GlyContact enables systematic analysis of glycan 3D structures, revealing how structural properties like flexibility and surface accessibility determine lectin binding and introducing AI models to predict structural features directly from sequences.

    • Luc Thomès
    • Roman Joeres
    • Daniel Bojar
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Genomic analyses applied to 14 childhood- and adult-onset psychiatric disorders identifies five underlying genomic factors that explain the majority of the genetic variance of the individual disorders.

    • Andrew D. Grotzinger
    • Josefin Werme
    • Jordan W. Smoller
    ResearchOpen Access
    Nature
    Volume: 649, P: 406-415
  • The interface between two oxide materials can play host to numerous exotic phenomenon. Here, the authors observe a four order of magnitude change in the conductance at a lanthanum-aluminate–strontium-titanate interface controlled by surface protonation, which can be reversed by exposure to light.

    • Keith A. Brown
    • Shu He
    • Jeremy Levy
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • Mapping of the neutrophil compartment using single-cell transcriptional data from multiple physiological and patological states reveals its organizational architecture and how cell state dynamics and trajectories vary during health, inflammation and cancer.

    • Daniela Cerezo-Wallis
    • Andrea Rubio-Ponce
    • Iván Ballesteros
    ResearchOpen Access
    Nature
    Volume: 649, P: 1003-1012
  • The capturing of high valent iron in a catalytic reaction is important but difficult task. Here, the authors report identification of a high-valent Fe(IV)-species with different spectroscopic tools such as Mössbauer spectroscopy and X-ray absorption spectroscopy during the course of an oxygen evolving reaction.

    • Nancy Li
    • Ryan G. Hadt
    • Daniel G. Nocera
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-6
  • Coordination-induced bond weakening (CIBW) by redox-active metals is used to weaken bonds in water and ammonia to facilitate proton-coupled electron transfer but achieving CIBW using aluminium as abundant metal is challenging. Here, the authors report a system that uses aluminum with a redox non-innocent ligand to achieve CIBW of O-H and N-H bonds.

    • Soumen Sinhababu
    • Roushan Prakash Singh
    • Neal P. Mankad
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-7
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Modulation of random heteropolymers results in globular polymer clusters with catalytic activity mimicking proteins.

    • Hao Yu
    • Marco Eres
    • Ting Xu
    Research
    Nature
    Volume: 649, P: 83-90
  • An analysis of 24,202 critical cases of COVID-19 identifies potentially druggable targets in inflammatory signalling (JAK1), monocyte–macrophage activation and endothelial permeability (PDE4A), immunometabolism (SLC2A5 and AK5), and host factors required for viral entry and replication (TMPRSS2 and RAB2A).

    • Erola Pairo-Castineira
    • Konrad Rawlik
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 617, P: 764-768
  • A galvanic strategy enables the intercalation of diverse molecular cations into bulk and few-layer van der Waals crystals under mild conditions, yielding 50 organic–inorganic superlattices. This method enables the definition of vertical and lateral intercalation heterostructures, opening avenues for the device integration of hybrid quantum materials.

    • Daniel Tezze
    • Covadonga Álvarez-García
    • Marco Gobbi
    Research
    Nature Synthesis
    P: 1-10
  • Respiration enhances cerebrospinal fluid flow through mechanical and autonomic pathways. Inhale length and diaphragm motion influence its displacement and net flow, identifying a modifiable, noninvasive mechanism relevant to brain homeostasis.

    • Seokbeen Lim
    • Petrice M. Cogswell
    • Paul H. Min
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • The synthesis, structure and reactivity of room-temperature-stable [Cp(C6F5)5]+[Sb3F16] is presented. Coordination of the cyclopentadienyl cation by [Sb3F16] or C6F6 stabilizes the antiaromatic singlet state in the solid state. Calculated hydride and fluoride ion affinities of the [Cp(C6F5)5]+ cation are higher than those of the tritylium cation [C(C6F5)3]+.

    • Yannick Schulte
    • Christoph Wölper
    • Stephan Schulz
    Research
    Nature Chemistry
    Volume: 16, P: 651-657
  • Here the authors provide an explanation for 95% of examined predicted loss of function variants found in disease-associated haploinsufficient genes in the Genome Aggregation Database (gnomAD), underscoring the power of the presented analysis to minimize false assignments of disease risk.

    • Sanna Gudmundsson
    • Moriel Singer-Berk
    • Anne O’Donnell-Luria
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • This Consensus Statement provides a definition of the term ‘gut health’, as well as a discussion of the relevant domains that contribute to gut health and a framework for appropriate use of the term in the context of therapeutic interventions.

    • Maria L. Marco
    • Marla Cunningham
    • Eamonn M. M. Quigley
    Reviews
    Nature Reviews Gastroenterology & Hepatology
    P: 1-17
  • Carbonyl–olefin metathesis reactions are a valuable tool in synthetic chemistry, but there are still some limitations in scope. Now, a catalyst system allows the activation of previously unreactive substrates for such a reaction by aluminium(iii)–ion pairs acting as Lewis acidic superelectrophiles.

    • Ashlee J. Davis
    • Rebecca B. Watson
    • Corinna S. Schindler
    Research
    Nature Catalysis
    Volume: 3, P: 787-796
  • Asexual-to-sexual switching underpins malaria transmission. Prajapati et al. identify an AP2-G loss-of function mutation and use it as a genetic tool to show that GDV1 is essential for initial ap2-g activation and sexual commitment initiation.

    • Surendra K. Prajapati
    • Jeffrey X. Dong
    • Kim C. Williamson
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-15
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Whole-genome sequencing, transcriptome-wide association and fine-mapping analyses in over 7,000 individuals with critical COVID-19 are used to identify 16 independent variants that are associated with severe illness in COVID-19.

    • Athanasios Kousathanas
    • Erola Pairo-Castineira
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 607, P: 97-103
  • Using data from a single time point, passenger-approximated clonal expansion rate (PACER) estimates the fitness of common driver mutations that lead to clonal haematopoiesis and identifies TCL1A activation as a mediator of clonal expansion.

    • Joshua S. Weinstock
    • Jayakrishnan Gopakumar
    • Siddhartha Jaiswal
    Research
    Nature
    Volume: 616, P: 755-763
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • As the structure of bulk aluminium chalcogenides is composed of three dimensional networks their molecular congeners exhibit a strong tendency to oligomerize. Here, the authors describe the isolation of a monotopic aluminium telluride and probe its structural and bonding characteristics.

    • Daniel Franz
    • Tibor Szilvási
    • Shigeyoshi Inoue
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-6
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Determining the covalency of actinide chemical bonding is a fundamentally important challenge. Here, the authors report a 15N nuclear magnetic resonance spectroscopy study of a terminal uranium-nitride, revealing exceptional NMR properties and covalency that redefine 15N NMR parameter space and actinide chemical bonding.

    • Jingzhen Du
    • John A. Seed
    • Stephen T. Liddle
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11