Filter By:

Journal Check one or more journals to show results from those journals only.

Choose more journals

Article type Check one or more article types to show results from those article types only.
Subject Check one or more subjects to show results from those subjects only.
Date Choose a date option to show results from those dates only.

Custom date range

Clear all filters
Sort by:
Showing 101–150 of 331 results
Advanced filters: Author: David Wyatt Clear advanced filters
  • The adhesion complex (Nap) in Mycoplasma genitalium is composed of the adhesin proteins P110 and P140 and essential for infectivity, motility and adhesion of this human pathogen. Here, the author present the structures of P140 alone and the P140/P110 complex in closed and open conformations and based on their structural data and further functional studies propose a mechanism for the attachment and release of M. genitalium to the host cell receptor.

    • David Aparicio
    • Margot P. Scheffer
    • Achilleas S. Frangakis
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Structural and biochemical analyses of human USP30 explain the basis of Lys6-linkage preference and regulation by PINK1 and Parkin, shedding light onto how USP30 can act as a brake on mitophagy.

    • Malte Gersch
    • Christina Gladkova
    • David Komander
    Research
    Nature Structural & Molecular Biology
    Volume: 24, P: 920-930
  • Rules that allow the design of strongly funnelled protein folding energy landscapes by relating secondary structure patterns to protein tertiary motifs are used to produce ideal protein structures stabilized by completely consistent local and non-local interactions.

    • Nobuyasu Koga
    • Rie Tatsumi-Koga
    • David Baker
    Research
    Nature
    Volume: 491, P: 222-227
  • Leucine-rich repeats (LRRs) can form horseshoe-like structures with different curvatures in nature. A computational approach now allows the design of 12 new LRR proteins with precise curvatures, using defined building blocks and junction modules.

    • Keunwan Park
    • Betty W Shen
    • David Baker
    Research
    Nature Structural & Molecular Biology
    Volume: 22, P: 167-174
  • Cytokinetic abscission relies on the local constriction after cytoskeleton disassembly, but it is not known how the actin filaments are disassembled. Here, the authors show that the redox enzyme MICAL1 is recruited by Rab35 and induces oxidation-mediated depolymerization of actin, which is required to recruit ESCRT-III and complete abscission.

    • Stéphane Frémont
    • Hussein Hammich
    • Arnaud Echard
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-16
  • Photoreceptor proteins utilise biological chromophores to regulate a large range of cellular processes in response to light. Here the authors identify and characterise a sub-family of multi-centre photoreceptors, termed photocobilins, that not only utilise B12 but also contain biliverdin (BV) as an additional chromophore.

    • Shaowei Zhang
    • Laura N. Jeffreys
    • Nigel S. Scrutton
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-16
  • CarH is a bacterial B12-binding photoreceptor involved in transcriptional regulation. Here, the authors provide insights into B12 dynamics and associated cobalt redox changes following light activation. These demonstrate the CarH response integrates light and oxygen sensing.

    • Harshwardhan Poddar
    • Ronald Rios-Santacruz
    • David Leys
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • Genome-wide association studies (GWAS) have improved our understanding of the genetic basis of lung adenocarcinoma but known susceptibility variants explain only a small fraction of the familial risk. Here, the authors perform a two-stage GWAS and report 12 novel genetic loci associated with lung adenocarcinoma in East Asians.

    • Jianxin Shi
    • Kouya Shiraishi
    • Qing Lan
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Crystal structures of human O-GlcNAc hydrolase (hOGA) fragments show that hOGA's dimeric structure is organized by swapping of an α-helical element and reveal features of inhibitor binding to the catalytic domain.

    • Christian Roth
    • Sherry Chan
    • Gideon J Davies
    Research
    Nature Chemical Biology
    Volume: 13, P: 610-612
  • This paper shows that the effects of amyloid-beta oligomers on long-term potentiation are mediated by the cellular prion protein — notorious for its involvement in diseases such as bovine spongiform encephalopathy, new variant Creutzfeldt–Jakob disease and kuru.

    • Juha Laurén
    • David A. Gimbel
    • Stephen M. Strittmatter
    Research
    Nature
    Volume: 457, P: 1128-1132
  • Chronic infection with SARS-CoV-2 leads to the emergence of viral variants that show reduced susceptibility to neutralizing antibodies in an immunosuppressed individual treated with convalescent plasma.

    • Steven A. Kemp
    • Dami A. Collier
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 592, P: 277-282
  • Sera from vaccinated individuals and some monoclonal antibodies show a modest reduction in neutralizing activity against the B.1.1.7 variant of SARS-CoV-2; but the E484K substitution leads to a considerable loss of neutralizing activity.

    • Dami A. Collier
    • Anna De Marco
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 593, P: 136-141
  • Computationally designed icosahedral protein-based assemblies can protect their genetic material and evolve in biochemical environments, suggesting a route to the custom design of synthetic nanomaterials for non-viral drug delivery.

    • Gabriel L. Butterfield
    • Marc J. Lajoie
    • David Baker
    Research
    Nature
    Volume: 552, P: 415-420
  • Pathogen triggered N-terminal degradation of NLRP1 and CARD8 by the proteasome releases their C-terminal UPA-CARD fragments (CT) to form the inflammasome, which in turn activates caspase-1. Here, the authors present the cryo-EM structures of the NLRP1-CT and CARD8-CT helical filaments as well as the ASCcaspase-1 octamer structure, which together with in vitro and cell based assays provide further insights into the architecture and specificity of the active NLRP1 and CARD8 inflammasomes.

    • L. Robert Hollingsworth
    • Liron David
    • Hao Wu
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-13
  • Post-international travel quarantine has been widely implemented to mitigate SARS-CoV-2 transmission, but the impacts of such policies are unclear. Here, the authors used linked genomic and contact tracing data to assess the impacts of a 14-day quarantine on return to England in summer 2020.

    • Dinesh Aggarwal
    • Andrew J. Page
    • Ewan M. Harrison
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-13
  • In this study, Aggarwal and colleagues perform prospective sequencing of SARS-CoV-2 isolates derived from asymptomatic student screening and symptomatic testing of students and staff at the University of Cambridge. They identify important factors that contributed to within university transmission and onward spread into the wider community.

    • Dinesh Aggarwal
    • Ben Warne
    • Ian G. Goodfellow
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16
  • Small-angle X-ray and neutron scattering are used to extract structural parameters and derive structural models of macromolecules in solution. The preparation of pure, monodisperse samples and exactly matching solvent blanks is crucial to the experiments' success.

    • Cy M Jeffries
    • Melissa A Graewert
    • Dmitri I Svergun
    Protocols
    Nature Protocols
    Volume: 11, P: 2122-2153
  • Fluorescent protein reporters based on GFP exist, but have intrinsic disadvantages. Here the authors incorporate pH, Ca2+ and protein–protein interaction sensing modalities into de novo designed mini-fluorescence-activating proteins (mFAPs), with increased photostability and smaller size, which bind a range of DFHBI chromophore variants.

    • Jason C. Klima
    • Lindsey A. Doyle
    • David Baker
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-19
  • Nebulized mRNA delivery has broad therapeutic potential but has proven challenging. Here, the authors report on a modified lipid nanoparticle with improved conditions to allow nebulization and demonstrate its application for delivering mRNA to the lungs.

    • Allen Y. Jiang
    • Jacob Witten
    • Daniel G. Anderson
    Research
    Nature Nanotechnology
    Volume: 19, P: 364-375
  • The Omicron variant evades vaccine-induced neutralization but also fails to form syncytia, shows reduced replication in human lung cells and preferentially uses a TMPRSS2-independent cell entry pathway, which may contribute to enhanced replication in cells of the upper airway. Altered fusion and cell entry characteristics are linked to distinct regions of the Omicron spike protein.

    • Brian J. Willett
    • Joe Grove
    • Emma C. Thomson
    ResearchOpen Access
    Nature Microbiology
    Volume: 7, P: 1161-1179
  • Next-generation lipid nanoparticles that target non-hepatocytes could be important clinical tools. Using in vivo DNA barcoding, the authors identify piperazine-containing lipids deliver mRNA to immune cells without targeting ligands.

    • Huanzhen Ni
    • Marine Z. C. Hatit
    • James E. Dahlman
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-9
    • W. Wyatt Oswald
    • David R. Foster
    • Deena L. Duranleau
    Research
    Nature Sustainability
    Volume: 3, P: 900-903
  • The condensation of RNA polymerase II (Pol II) into transcriptionally active clusters is critical for eukaryotic gene regulation and pre-mRNA transcription. Here the authors show that a tight network of tyrosine-proline interactions imparts temperature and concentration-dependent self-coacervation of Pol II’s C-terminal domain (CTD).

    • David Flores-Solis
    • Irina P. Lushpinskaia
    • Markus Zweckstetter
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-15
  • A study of the evolution of the SARS-CoV-2 virus in England between September 2020 and June 2021 finds that interventions capable of containing previous variants were insufficient to stop the more transmissible Alpha and Delta variants.

    • Harald S. Vöhringer
    • Theo Sanderson
    • Moritz Gerstung
    ResearchOpen Access
    Nature
    Volume: 600, P: 506-511
  • Multiple scattering complicates femtosecond optics such that phase conjugation allows spatial focusing and imaging through a multiple scattering medium, but temporal control is problematic. McCabeet al. report the full spatio-temporal characterization and recompression of a femtosecond speckle field.

    • David J. McCabe
    • Ayhan Tajalli
    • Béatrice Chatel
    Research
    Nature Communications
    Volume: 2, P: 1-5
  • Structural insights demonstrating small-molecule-mediated dimerization of BRD4 bromodomains led to the development of biBET, a compound that potently inhibits BRD4–acetyl-lysine interactions by bivalent binding to tandem bromodomains.

    • Michael J Waring
    • Huawei Chen
    • Yi Yao
    Research
    Nature Chemical Biology
    Volume: 12, P: 1097-1104
  • The computational design of an extremely stable icosahedral self-assembling protein nanocage is presented; the icosahedron should be useful for applications ranging from calibrating fluorescence microscopy to drug delivery.

    • Yang Hsia
    • Jacob B. Bale
    • David Baker
    Research
    Nature
    Volume: 535, P: 136-139
  • A hyper-stable de novo protein mimic of interleukin-2 computationally designed to not interact with a regulatory T-cell specific receptor subunit has improved therapeutic activity in mouse models of melanoma and colon cancer.

    • Daniel-Adriano Silva
    • Shawn Yu
    • David Baker
    Research
    Nature
    Volume: 565, P: 186-191
  • In retroviruses, the capsid protein (CA) forms a shell surrounding the viral core. Here the authors combine cryo-electron microscopy with NMR and X-ray crystallography to examine the CA structure from the human endogenous retrovirus HML2 (HERV-K) and determine the structures of four Fullerene CA closed shells that reveal the molecular basis of capsid assembly.

    • Oliver Acton
    • Tim Grant
    • Peter B. Rosenthal
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • The conversion of auditory and vestibular stimuli into electrical signals is initiated by force transmitted to a mechanotransduction channel through the tip link. Here authors show that a single tip-link bond is more mechanically stable relative to classic cadherins, and that the double stranded tip-link connection is stabilized by single strand rebinding facilitated by strong cis-dimerization domains.

    • Eric M. Mulhall
    • Andrew Ward
    • Wesley P. Wong
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-15
  • Sun et al. has studied the genetically encodable halotyrosines in proteins of the prokaryotic cell division machinery to elucidate the general role of halogenation in cellular lifespan and oxidative damage-induced diseases such as aging and cancer.

    • Huan Sun
    • Haiyang Jia
    • Nediljko Budisa
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-13
  • Staphylococcal biofilm formation is promoted by the surface protein SasG. Here, the authors characterize the structure and remarkable mechanical strength of the repeat region of SasG, and show how elongation is achieved by obligate folding of the disordered regions within the repeating units.

    • Dominika T. Gruszka
    • Fiona Whelan
    • Jane Clarke
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • The transportation of large molecules through the vascular endothelium presents a major challenge forin vivodrug delivery. Here, the authors demonstrate the potential of using external magnetic fields and magnetic nanoparticles to enhance the local extravasation of circulating large molecules.

    • Yongzhi Qiu
    • Sheng Tong
    • Gang Bao
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-10
  • Typically, ion conducting polymers exhibit a trade-off between mechanical robustness and ionic conducting performance. Here, the authors utilize supramolecular chemistry obtaining extremely tough electrolytes with high ionic conductivity and enabling stretchable lithium-ion batteries.

    • David G. Mackanic
    • Xuzhou Yan
    • Zhenan Bao
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-11
  • Radionuclide brachytherapy delivered via an injectable biopolymer depot conjugated with iodine-131 and combined with systemically delivered paclitaxel induced the complete regression of multiple subcutaneous and orthotopic pancreatic tumours in mice.

    • Jeffrey L. Schaal
    • Jayanta Bhattacharyya
    • Ashutosh Chilkoti
    Research
    Nature Biomedical Engineering
    Volume: 6, P: 1148-1166