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Showing 1–8 of 8 results
Advanced filters: Author: Jessen V. Bredeson Clear advanced filters

  • While greater yam provides food and income security for millions of people around the world, there are limited genomic resources available. Here, the authors report a chromosome-scale assembly of the greater yam genome as well as quantitative trait loci associated with anthracnose resistance and tuber traits.

    • Jessen V. Bredeson
    • Jessica B. Lyons
    • Daniel S. Rokhsar
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16

  • Frogs are an ancient and ecologically diverse group of amphibians that include important model systems. This paper reports genome sequences of multiple frog species, revealing remarkable stability of frog chromosomes and centromeres, along with highly recombinogenic extended subtelomeres.

    • Jessen V. Bredeson
    • Austin B. Mudd
    • Daniel S. Rokhsar
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18

  • Deeply conserved syntenic characters unite sponges with bilaterians, cnidarians, and placozoans in a monophyletic clade to the exclusion of the comb jellies (ctenophores)—placing ctenophores as the sister group to all other animals.

    • Darrin T. Schultz
    • Steven H. D. Haddock
    • Daniel S. Rokhsar
    ResearchOpen Access
    Nature
    Volume: 618, P: 110-117

  • The perennial grass Miscanthus is a promising biomass crop. Here, via genomics and transcriptomics, the authors reveal its allotetraploid origin, characterize gene expression associated with rhizome development and nutrient recycling, and describe the hybrid origin of the triploid M. x giganteus.

    • Therese Mitros
    • Adam M. Session
    • Daniel S. Rokhsar
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11

  • Mudd et al. provide chromosome-scale genome assemblies for the Chinese and Indian muntjac deer and demonstrate evidence for rapid evolution of genes involved in chromosome maintenance. Their comparative analyses generate new insights into rapid karyotype evolution.

    • Austin B. Mudd
    • Jessen V. Bredeson
    • Daniel S. Rokhsar
    ResearchOpen Access
    Communications Biology
    Volume: 3, P: 1-10

  • Sequencing the genomes of two enteropneusts reveals complex genomic organization and developmental innovation in the ancestor of deuterostomes, a group of animals including echinoderms (starfish and their relatives) and chordates (which includes humans).

    • Oleg Simakov
    • Takeshi Kawashima
    • John Gerhart
    ResearchOpen Access
    Nature
    Volume: 527, P: 459-465

  • Fei Lu, Punna Ramu and colleagues construct a cassava haplotype map (HapMapII) by using deep-sequencing data from 241 accessions and identify over 28 million segregating variants. They find that clonal propagation has led to fixation of deleterious mutations, which have been ineffectively purged, owing to limited recombination

    • Punna Ramu
    • Williams Esuma
    • Fei Lu
    ResearchOpen Access
    Nature Genetics
    Volume: 49, P: 959-963