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Showing 201–250 of 848 results
Advanced filters: Author: Jessica K. Wang Clear advanced filters
  • Rechargeable aqueous zinc batteries are heralded as a sustainable energy technology but still face technical challenges. The hybrid electrolyte here eliminates hydrogen evolution reaction, the most thorny issue, and allows for impressive battery performance even under harsh conditions.

    • Heng Jiang
    • Longteng Tang
    • Xiulei Ji
    Research
    Nature Sustainability
    Volume: 6, P: 806-815
  • G-quadruplex are higher-order nucleotide structures within G-rich sequences with regulatory roles. Here, the authors provide the structure of a viral genomic RNA G-quadruplex using X-ray crystallography. They report unusual features of the West Nile virus NS5B quadruplex which expands our knowledge of quadruplex complexity and will aid in designing molecules to target them.

    • J. Ross Terrell
    • Thao T. Le
    • Jessica L. Siemer
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-10
  •  A method for topological automatic cell type classification across subcellular resolution spatial transcriptomic platforms is proposed, resolving cell type information and locating sparsely dispersed cells in human kidney and mouse kidney and brain.

    • Katherine Benjamin
    • Aneesha Bhandari
    • Katherine R. Bull
    ResearchOpen Access
    Nature
    Volume: 630, P: 943-949
  • Here the authors report an optimized self-replicating RNA (srRNA) vaccine approach that generates protective immunity at much lower doses than mRNA vaccines in mice. In a Phase 1 study using rabies glycoprotein as antigen, they show robust immune responses at doses as low as 0.1 µg, with a favorable safety profile.

    • Christian J. Maine
    • Shigeki J. Miyake-Stoner
    • Parinaz Aliahmad
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Structural variants (SVs) contribute to the genetic architecture of many brain-related disorders. Here, the authors integrate SV calls from genome sequencing (n = 755) with RNA-seq data (n = 629) from post-mortem dorsal lateral prefrontal cortex to annotate the gene regulatory effects of SVs in the human brain and their potential to contribute to disease.

    • Lide Han
    • Xuefang Zhao
    • Douglas M. Ruderfer
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Delivering therapeutics to the brain is challenging because of the hard-to-cross blood–brain barrier. Here, the authors show that HER3, which is expressed on the surface of many metastatic tumours, is associated with the brain endothelium and can drive accumulation of HER3-targeted nanoparticles within the brain, for therapy against HER3-positive tumours.

    • Felix Alonso-Valenteen
    • Simoun Mikhael
    • Lali K. Medina-Kauwe
    ResearchOpen Access
    Nature Nanotechnology
    Volume: 20, P: 683-696
  • Severe sepsis has a high mortality rate. Here, the authors provide genomic, transcriptomic, proteomic and metabolomic data across four sepsis-causing pathogens and identify a signature of global increase in fatty acid and lipid biosynthesis as well as cholesterol acquisition.

    • Andre Mu
    • William P. Klare
    • Mark J. Walker
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-21
  • Most studies of the genetics of the metabolome have been done in individuals of European descent. Here, the authors integrate genomics and metabolomics in Black individuals, highlighting the value of whole genome sequencing in diverse populations and linking circulating metabolites to human disease.

    • Usman A. Tahir
    • Daniel H. Katz
    • Robert E. Gerszten
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-16
  • Lung damage increases abdominal aortic aneurysm (AAA) incidence, but the mechanism was unclear. Here, the authors show that injured lungs leak HMGB1, increasing RIPK3 expression in arterial macrophages that subsequently alters mitochondrial function, leading to MMP12 expression and AAA development.

    • Ludovic Boytard
    • Tarik Hadi
    • Bhama Ramkhelawon
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • A targeted protein stabilization platform termed deubiquitinase-targeting chimera (DUBTAC) was developed based on heterobifunctional small molecules consisting of a deubiquitinase OTUB1 recruiter linked to a protein-targeting ligand.

    • Nathaniel J. Henning
    • Lydia Boike
    • Daniel K. Nomura
    Research
    Nature Chemical Biology
    Volume: 18, P: 412-421
  • Multiomics analysis of tumor samples from the phase 1b GO30140 and phase 3 IMbrave150 trials reveals baseline immune and genetic features that might identify patients with advanced hepatocellular carcinoma who will benefit from atezolizumab and bevacizumab combination therapy.

    • Andrew X. Zhu
    • Alexander R. Abbas
    • Yulei Wang
    Research
    Nature Medicine
    Volume: 28, P: 1599-1611
  • Encapsulating large and contorted nanographenes inside artificial receptors remain challenging. This work reports the synthesis, characterization and binding properties of a trigonal prismatic cage compound that can serve as a receptor for contorted nanographene derivatives.

    • Huang Wu
    • Yu Wang
    • J. Fraser Stoddart
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-13
  • Long-term selective breeding has produced strains of the red fox (Vulpes vulpes) with different behaviours. Here, the authors sequence the genomes of tame and aggressive strains to uncover the genetic regions that have responded to selection for behaviour.

    • Anna V. Kukekova
    • Jennifer L. Johnson
    • Guojie Zhang
    ResearchOpen Access
    Nature Ecology & Evolution
    Volume: 2, P: 1479-1491
  • Brain slices offer an experimental window into human neurophysiology. Using high-density microelectrode array recordings and adeno-associated virus–mediated optogenetics, the authors demonstrate that optogenetic targeting of CAMK2A+ neurons can affect network activity in human hippocampal slices.

    • John P. Andrews
    • Jinghui Geng
    • Tomasz Jan Nowakowski
    Research
    Nature Neuroscience
    Volume: 27, P: 2487-2499
  • We find that leptin-target neurons expressing basonuclin 2 in the arcuate nucleus that acutely suppress appetite by directly inhibiting agouti-related protein neurons are a key component of the neural circuit that maintains energy balance.

    • Han L. Tan
    • Luping Yin
    • Jeffrey M. Friedman
    ResearchOpen Access
    Nature
    Volume: 636, P: 198-205
  • Single-cell analysis of head and neck squamous cell carcinoma (HNSCC), specifically from human papillomavirus (HPV)-positive and HPV-negative oropharynx tumors, reveals high levels of inter- and intratumoral heterogeneity. Patterns of HPV gene expression were divergent within HPV-positive tumors, with corresponding functional effects on treatment resistance.

    • Sidharth V. Puram
    • Michael Mints
    • Itay Tirosh
    Research
    Nature Genetics
    Volume: 55, P: 640-650
  • Analysis of whole-genome sequencing data across 2,658 tumors spanning 38 cancer types shows that chromothripsis is pervasive, with a frequency of more than 50% in several cancer types, contributing to oncogene amplification, gene inactivation and cancer genome evolution.

    • Isidro Cortés-Ciriano
    • Jake June-Koo Lee
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 331-341
  • Most studies on HIV-1 proviruses that persist during antiretroviral therapy have focused on males with HIV-1 subtype B, even though the majority of people living with HIV globally have non-B subtypes. Here, the authors describe the proviral genetic landscape of HIV-1 subtypes A1 and D in Ugandan females and males using near-full-length proviral sequencing. The authors also describe a molecular assay for intact proviral quantification of these HIV-1 subtypes.

    • Guinevere Q. Lee
    • Pragya Khadka
    • Jessica L. Prodger
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-10
  • Whether mucinous ovarian carcinoma (MOC) arises from cells at the ovary or from metastases from other primary sites is an unanswered question. Here, Cheasley et al perform a genetic analysis of the disease, showing that MOC arises at the ovary.

    • Dane Cheasley
    • Matthew J. Wakefield
    • Kylie L. Gorringe
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-11
  • Transposon based screens carried out in mice can identify genes critical for tumourigensis. Here, the authors describe transposon screens in mouse models of breast cancer and highlight a large group of tumour suppressors that could underlie selection for common chromosome arm losses in cancer.

    • Nathan F. Schachter
    • Jessica R. Adams
    • Sean E. Egan
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-19
  • Strontium isotope analysis can be applied to animal and plant tissues to help determine their provenance. Here, the authors generate a strontium isoscape of sub-Saharan Africa using data from 2266 environmental samples and demonstrate its efficacy by tracing the African roots of individuals from historic slavery contexts.

    • Xueye Wang
    • Gaëlle Bocksberger
    • Vicky M. Oelze
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Endocrinologists have traditionally focused on studying one hormone or organ system at a time. Here the authors use transcriptomic data from the mouse lemur to globally characterize primate hormonal signaling, describing hormone sources and targets, identifying conserved and primate specific regulation, and elucidating principles of the network.

    • Shixuan Liu
    • Camille Ezran
    • James E. Ferrell Jr.
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-27
  • Environmental temperature changes can alter cell membrane lipid composition but the mechanisms underlying this conserved mechanism are unclear. Here, the authors identify the megaprotein LPD-3 in C. elegans as critical for normal phospholipid distribution and cold resilience.

    • Changnan Wang
    • Bingying Wang
    • Dengke K. Ma
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-11
  • Two algal proteins, MITH1 and SAGA1, play key roles in formation of membranes that deliver CO2 to the pyrenoid, a CO2-concentrating organelle. Their discovery marks a key milestone towards engineering a pyrenoid into land plants for improved yields.

    • Jessica H. Hennacy
    • Nicky Atkinson
    • Martin C. Jonikas
    ResearchOpen Access
    Nature Plants
    Volume: 10, P: 2038-2051
  • Electrical stimulation of the neuromuscular system holds promise for therapeutic biomedical applications, but is currently restricted by power. Here, the authors introduce fully implantable resonator-based designs achieving ±20 V compliance and >300 mW output, enabling multichannel, biphasic, current-controlled operation to evoke functional gate patterns for 6-weeks in freely behaving rats.

    • Alex Burton
    • Zhong Wang
    • Philipp Gutruf
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-17
  • Here the authors show that expanding global ancestry diversity in genomic datasets improves detection of genomic regions intolerant to variation, identifying areas more likely to harbor disease-causing mutations.

    • Alexander L. Han
    • Chloe F. Sands
    • Ryan S. Dhindsa
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-9
  • Comprehensive integration of gene expression with epigenetic features is needed to understand the transition of kidney cells from health to injury. Here, the authors integrate dual single nucleus RNA expression and chromatin accessibility, DNA methylation, and histone modifications to decipher the chromatin landscape of the kidney in reference and adaptive injury cell states, identifying a transcription factor network of ELF3, KLF6, and KLF10 which regulates adaptive repair and maladaptive failed repair.

    • Debora L. Gisch
    • Michelle Brennan
    • Michael T. Eadon
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-21
  • The genetics and clinical consequences of resting heart rate (RHR) remain incompletely understood. Here, the authors discover new genetic variants associated with RHR and find that higher genetically predicted RHR decreases risk of atrial fibrillation and ischemic stroke.

    • Yordi J. van de Vegte
    • Ruben N. Eppinga
    • Pim van der Harst
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-21
  • A main symptom of chronic insufficient sleep is excessive daytime sleepiness. Here, Wang et al. report 42 genome-wide significant loci for self-reported daytime sleepiness in 452,071 individuals from the UK Biobank that cluster into two biological subtypes of either sleep propensity or sleep fragmentation.

    • Heming Wang
    • Jacqueline M. Lane
    • Richa Saxena
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-12
  • Sirtuins are NAD+-dependent deacylases implicated in the regulation of stress responses, bioenergetics and epigenetic control. Here the authors describe the crystal structure of a sirtuin-activating compounds (STAC)-sirtuin complex and begin to elucidate the mechanism of sirtuins activation by STACs.

    • Han Dai
    • April W. Case
    • James L. Ellis
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-10
  • Alterations in the tumour microenvironment (TME) can contribute to prostate cancer progression, but it is unclear how tumours mediate those changes. Here, analysis of human prostate cancer tissues and key stages of prostate cancer progression in a genetically engineered mouse model using single-cell RNA-sequencing reveals the central role of MYC signalling in reprogramming the TME.

    • Mindy K. Graham
    • Rulin Wang
    • Srinivasan Yegnasubramanian
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-20
  • The sarcoplasmic (SR) and endoplasmic reticulum (ER) are involved in heart development but how this arises is unclear. Here, the authors show that loss of a SR/ER protein REEP5 causes membrane destabilization and decreased cardiac myocyte contractility, with cardiac dysfunction in mutant mouse and zebrafish models.

    • Shin-Haw Lee
    • Sina Hadipour-Lakmehsari
    • Anthony O. Gramolini
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-20
  • Genome-wide analyses in over one million self-reported cases and controls identify genetic variants associated with stuttering and find genetic correlations with autism, depression and impaired musical rhythm, supporting a potential neurological basis for stuttering.

    • Hannah G. Polikowsky
    • Alyssa C. Scartozzi
    • Jennifer E. Below
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 1835-1847
  • This study describes the integrative analysis of 111 reference human epigenomes, profiled for histone modification patterns, DNA accessibility, DNA methylation and RNA expression; the results annotate candidate regulatory elements in diverse tissues and cell types, their candidate regulators, and the set of human traits for which they show genetic variant enrichment, providing a resource for interpreting the molecular basis of human disease.

    • Anshul Kundaje
    • Wouter Meuleman
    • Manolis Kellis
    ResearchOpen Access
    Nature
    Volume: 518, P: 317-330
  • An antibody–drug conjugate that targets the pan-haematopoietic marker CD45 combined with transplanted stem cells engineered to be shielded from it can eradicate leukaemic cells while preserving haematopoiesis.

    • Simon Garaudé
    • Romina Marone
    • Lukas T. Jeker
    ResearchOpen Access
    Nature
    Volume: 630, P: 728-735