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Showing 51–85 of 85 results

Advanced filters: Author: Jonas Nilsson Clear advanced filters

Systematic analysis of noncoding somatic mutations and gene expression alterations across 14 tumor types

Erik Larsson and colleagues present an analysis pipeline for identifying likely transcription-altering noncoding somatic mutations in cancer using publicly available data from 505 tumor genomes across 14 cancer types. They find that TERT promoter mutations show strong associations to altered transcriptional levels and identify recurrent promoter mutations in DPH3 and PLEKHS1.

Nils J Fredriksson
Lars Ny
Erik Larsson
Research10 Nov 2014
Nature Genetics

Volume: 46, P: 1258-1263
Successful delivery of large-size CRISPR/Cas9 vectors in hard-to-transfect human cells using small plasmids

Søndergaard et al. show that electroporation and lipofectamine-based cell transfection of cancer cell lines and primary cells can be improved by adding a small vector to a large CRISPR vector. This study presents an optimized protocol for genome engineering by increasing transfection efficiency and cell viability.

Jonas Nørskov Søndergaard
Keyi Geng
Claudia Kutter
ResearchOpen Access19 Jun 2020
Communications Biology

Volume: 3, P: 1-6
Early-onset atrial fibrillation patients show reduced left ventricular ejection fraction and increased atrial fibrosis

Laura Andreasen
Litten Bertelsen
Morten S. Olesen
ResearchOpen Access22 Jun 2020
Scientific Reports

Volume: 10, P: 1-8
Correction: A patient-derived xenograft pre-clinical trial reveals treatment responses and a resistance mechanism to karonudib in metastatic melanoma

Berglind O. Einarsdottir
Joakim Karlsson
Jonas A. Nilsson
Amendments and CorrectionsOpen Access06 Feb 2020
Cell Death & Disease

Volume: 11, P: 1
Brugada syndrome risk loci seem protective against atrial fibrillation

Laura Andreasen
Jonas B Nielsen
Morten S Olesen
Research26 Mar 2014
European Journal of Human Genetics

Volume: 22, P: 1357-1361
BET bromodomain inhibitors synergize with ATR inhibitors in melanoma

Somsundar Veppil Muralidharan
Berglind Osk Einarsdottir
Jonas A Nilsson
ResearchOpen Access10 Aug 2017
Cell Death & Disease

Volume: 8, P: e2982
LUND-PROBE – LUND Prostate Radiotherapy Open Benchmarking and Evaluation dataset

Viktor Rogowski
Lars E. Olsson
Christian Jamtheim Gustafsson
ResearchOpen Access11 Apr 2025
Scientific Data

Volume: 12, P: 1-9
Myc pathways provoking cell suicide and cancer

Jonas A Nilsson
John L Cleveland
Reviews08 Dec 2003
Oncogene

Volume: 22, P: 9007-9021
Machine learning reveals limited contribution of trans-only encoded variants to the HLA-DQ immunopeptidome

The analysis integrating immunoinformatics data mining models with large volumes of high-quality HLA-DQ specific immunopeptidomics data reveals trans-only HLA-DQ variants have a limited to no contribution to the overall HLA-DQ immunopeptidome.

Jonas Birkelund Nilsson
Saghar Kaabinejadian
Morten Nielsen
ResearchOpen Access21 Apr 2023
Communications Biology

Volume: 6, P: 1-13
Controls of the global overturning circulation of the ocean

Fabien Roquet
Michael J. Bell
Malin Ödalen
ReviewsOpen Access15 Aug 2025
npj Climate and Atmospheric Science

Volume: 8, P: 1-19
Glycosaminoglycan Domain Mapping of Cellular Chondroitin/Dermatan Sulfates

Andrea Persson
Egor Vorontsov
Jonas Nilsson
ResearchOpen Access26 Feb 2020
Scientific Reports

Volume: 10, P: 1-12
Erratum: BET bromodomain inhibitors synergize with ATR inhibitors in melanoma

Somsundar Veppil Muralidharan
Berglind Osk Einarsdottir
Jonas A Nilsson
Amendments and Corrections14 Dec 2017
Cell Death & Disease

Volume: 8, P: e3177
Electron Paramagnetic Resonance of Single Magnetic Moment on a Surface

P. Berggren
J. Fransson
ResearchOpen Access09 May 2016
Scientific Reports

Volume: 6, P: 1-7
Identification of tumorigenic and therapeutically actionable mutations in transplantable mouse tumor cells by exome sequencing

J Bhadury
M D López
J A Nilsson
ResearchOpen Access15 Apr 2013
Oncogenesis

Volume: 2, P: e44
ECG and CT for the detection of left atrial enlargement in hypertensive individuals—a population-based study

Emma Julia Petronella Nilsson
Jørgen Tobias Kühl
Klaus Fuglsang Kofoed
Research28 Apr 2022
Hypertension Research

Volume: 45, P: 1382-1391
Quantum efficiency, purity and stability of a tunable, narrowband microwave single-photon source

Yong Lu
Andreas Bengtsson
Per Delsing
ResearchOpen Access23 Sept 2021
npj Quantum Information

Volume: 7, P: 1-8
Ryder Glacier in northwest Greenland is shielded from warm Atlantic water by a bathymetric sill

A bathymetric sill in Sherard Osborn Fjord, northwest Greenland shields Ryder Glacier from melting by warm Atlantic water found at the bottom of the fjord, according to high-resolution bathymetric mapping and oceanographic data.

Martin Jakobsson
Larry A. Mayer
June Padman
ResearchOpen Access04 Nov 2020
Communications Earth & Environment

Volume: 1, P: 1-10
The climate sensitivity of northern Greenland fjords is amplified through sea-ice damming

Much higher surface temperatures in a north Greenland fjord, compared to a neighbouring fjord, during high air temperatures in 2019 can be explained by a sea ice dam at the fjord entrance that trapped a buoyant surface layer, suggests an analysis of hydrographic observations.

Christian Stranne
Johan Nilsson
Martin Jakobsson
ResearchOpen Access12 Apr 2021
Communications Earth & Environment

Volume: 2, P: 1-8
Proteomic approach for understanding milder neurotoxicity of Carfilzomib against Bortezomib

Betul Karademir
Gulce Sari
Tobias Jung
ResearchOpen Access05 Nov 2018
Scientific Reports

Volume: 8, P: 1-13
Synthetic standard aided quantification and structural characterization of amyloid-beta glycopeptides enriched from cerebrospinal fluid of Alzheimer’s disease patients

Jonas Nilsson
Gunnar Brinkmalm
Göran Larson
ResearchOpen Access02 Apr 2019
Scientific Reports

Volume: 9, P: 1-13
Reappraisal of variants previously linked with sudden infant death syndrome: results from three population-based cohorts

Christian Paludan-Müller
Jonas Ghouse
Morten S. Olesen
Research01 May 2019
European Journal of Human Genetics

Volume: 27, P: 1427-1435
Osteopontin protects against lung injury caused by extracellular histones

Gopinath Kasetty
Praveen Papareddy
Arne Egesten
Research16 Aug 2018
Mucosal Immunology

Volume: 12, P: 39-50
New population-based exome data are questioning the pathogenicity of previously cardiomyopathy-associated genetic variants

Charlotte Andreasen
Jonas B Nielsen
Morten S Olesen
ResearchOpen Access09 Jan 2013
European Journal of Human Genetics

Volume: 21, P: 918-928
Site-specific identification of heparan and chondroitin sulfate glycosaminoglycans in hybrid proteoglycans

Fredrik Noborn
Alejandro Gomez Toledo
Göran Larson
ResearchOpen Access03 Oct 2016
Scientific Reports

Volume: 6, P: 1-11
SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population

Adam Ameur
Johan Dahlberg
Ulf Gyllensten
ResearchOpen Access23 Aug 2017
European Journal of Human Genetics

Volume: 25, P: 1253-1260
An entangled-LED-driven quantum relay over 1 km

Christiana Varnava
R Mark Stevenson
Andrew J Shields
ResearchOpen Access15 Mar 2016
npj Quantum Information

Volume: 2, P: 1-7
Expression, activity and localization of lysosomal sulfatases in Chronic Obstructive Pulmonary Disease

Julie Weidner
Prajakta Jogdand
Ellen Tufvesson
ResearchOpen Access13 Feb 2019
Scientific Reports

Volume: 9, P: 1-13
BET bromodomain inhibitors synergize with ATR inhibitors to induce DNA damage, apoptosis, senescence-associated secretory pathway and ER stress in Myc-induced lymphoma cells

S V Muralidharan
J Bhadury
J A Nilsson
Research25 Jan 2016
Oncogene

Volume: 35, P: 4689-4697
High prevalence of genetic variants previously associated with LQT syndrome in new exome data

Lena Refsgaard
Anders G Holst
Morten S Olesen
ResearchOpen Access29 Feb 2012
European Journal of Human Genetics

Volume: 20, P: 905-908
APOE-ɛ4 effects on longitudinal decline in olfactory and non-olfactory cognitive abilities in middle-aged and old adults

Maria Josefsson
Maria Larsson
Jonas Olofsson
ResearchOpen Access28 Apr 2017
Scientific Reports

Volume: 7, P: 1-9
Harmonised statistics and maps of forest biomass and increment in Europe

Valerio Avitabile
Roberto Pilli
Sarah Mubareka
ResearchOpen Access06 Mar 2024
Scientific Data

Volume: 11, P: 1-17
Numerous Brugada syndrome–associated genetic variants have no effect on J-point elevation, syncope susceptibility, malignant cardiac arrhythmia, and all-cause mortality

Jonas Ghouse
Christian T. Have
Morten S. Olesen
Research06 Oct 2016
Genetics in Medicine

Volume: 19, P: 521-528
Pharmacologic RNA splicing modulation: a novel mechanism to enhance neoantigen-directed anti-tumor immunity and immunotherapy response

Kerryn Elliott
Jonas Nilsson
Jimmy Van den Eynden
Research HighlightsOpen Access28 Oct 2021
Signal Transduction and Targeted Therapy

Volume: 6, P: 1-2
Expression of the chemokine CXCL14 in the tumour stroma is an independent marker of survival in breast cancer

Elin Sjöberg
Martin Augsten
Arne Östman
ResearchOpen Access26 Apr 2016
British Journal of Cancer

Volume: 114, P: 1117-1124
TGF-β1-induced EMT promotes targeted migration of breast cancer cells through the lymphatic system by the activation of CCR7/CCL21-mediated chemotaxis

M-F Pang
A-M Georgoudaki
J Fuxe
ResearchOpen Access11 May 2015
Oncogene

Volume: 35, P: 748-760

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