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Showing 1–16 of 16 results

Advanced filters: Author: Markus Göker Clear advanced filters

Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

Supratim Mukherjee
Rekha Seshadri
Nikos C Kyrpides
Amendments and Corrections05 Apr 2018
Nature Biotechnology

Volume: 36, P: 368
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

Information on type material is of fundamental importance in prokaryote taxonomy. Here, the authors develop TYGS, the Type (Strain) Genome Server, for genome-based prokaryote taxonomy and analysis using a comprehensive database of genomic and taxonomic data.

Jan P. Meier-Kolthoff
Markus Göker
ResearchOpen Access16 May 2019
Nature Communications

Volume: 10, P: 1-10
Cobaviruses – a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems

Vera Bischoff
Boyke Bunk
Cristina Moraru
ResearchOpen Access04 Feb 2019
The ISME Journal

Volume: 13, P: 1404-1421
ICSP response to ‘Science depends on nomenclature, but nomenclature is not science’

Iain C. Sutcliffe
David R. Arahal
Aharon Oren
Correspondence18 Feb 2022
Nature Reviews Microbiology

Volume: 20, P: 249-250
ICSP response to ‘Regulating access can restrict participation in reporting new species and taxa’

Aharon Oren
Markus Göker
Iain C. Sutcliffe
Correspondence27 Jun 2022
Nature Microbiology

Volume: 7, P: 1711-1712
Genomic insights into the taxonomic status of the Bacillus cereus group

Yang Liu
Qiliang Lai
Zongze Shao
ResearchOpen Access16 Sept 2015
Scientific Reports

Volume: 5, P: 1-11
Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

The Critical Assessment of Metagenome Interpretation (CAMI) community initiative presents results from its first challenge, a rigorous benchmarking of software for metagenome assembly, binning and taxonomic profiling.

Alexander Sczyrba
Peter Hofmann
Alice C McHardy
ResearchOpen Access02 Oct 2017
Nature Methods

Volume: 14, P: 1063-1071
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

Metagenomic and microbial sequence data are made easier to interpret with the addition of 1,003 genomes to the Genomic Encyclopedia of Bacteria and Archaea.

Supratim Mukherjee
Rekha Seshadri
Nikos C Kyrpides
ResearchOpen Access12 Jun 2017
Nature Biotechnology

Volume: 35, P: 676-683
Ongoing diversification of the global fish pathogen Piscirickettsia salmonis through genetic isolation and transposition bursts

Isabel Schober
Boyke Bunk
Jörg Overmann
ResearchOpen Access18 Oct 2023
The ISME Journal

Volume: 17, P: 2247-2258
Horizontal operon transfer, plasmids, and the evolution of photosynthesis in Rhodobacteraceae

Henner Brinkmann
Markus Göker
Jörn Petersen
ResearchOpen Access24 May 2018
The ISME Journal

Volume: 12, P: 1994-2010
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential

Lorena Carro
Imen Nouioui
Michael Goodfellow
ResearchOpen Access11 Jan 2018
Scientific Reports

Volume: 8, P: 1-23
Dual function of tropodithietic acid as antibiotic and signaling molecule in global gene regulation of the probiotic bacterium Phaeobacter inhibens

Paul G. Beyersmann
Jürgen Tomasch
Thorsten Brinkhoff
ResearchOpen Access07 Apr 2017
Scientific Reports

Volume: 7, P: 1-9
Metabolic traits of an uncultured archaeal lineage -MSBL1- from brine pools of the Red Sea

Romano Mwirichia
Intikhab Alam
Ulrich Stingl
ResearchOpen Access13 Jan 2016
Scientific Reports

Volume: 6, P: 1-14
Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats

Meinhard Simon
Carmen Scheuner
Markus Göker
ResearchOpen Access20 Jan 2017
The ISME Journal

Volume: 11, P: 1483-1499
Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

Volkan Sevim
Juna Lee
Tanja Woyke
ResearchOpen Access26 Nov 2019
Scientific Data

Volume: 6, P: 1-9
Biofilm plasmids with a rhamnose operon are widely distributed determinants of the ‘swim-or-stick’ lifestyle in roseobacters

Victoria Michael
Oliver Frank
Jörn Petersen
ResearchOpen Access08 Mar 2016
The ISME Journal

Volume: 10, P: 2498-2513

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Erratum: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

Cobaviruses – a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems

ICSP response to ‘Science depends on nomenclature, but nomenclature is not science’

ICSP response to ‘Regulating access can restrict participation in reporting new species and taxa’

Genomic insights into the taxonomic status of the Bacillus cereus group

Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life

Ongoing diversification of the global fish pathogen Piscirickettsia salmonis through genetic isolation and transposition bursts

Horizontal operon transfer, plasmids, and the evolution of photosynthesis in Rhodobacteraceae

Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential

Dual function of tropodithietic acid as antibiotic and signaling molecule in global gene regulation of the probiotic bacterium Phaeobacter inhibens

Metabolic traits of an uncultured archaeal lineage -MSBL1- from brine pools of the Red Sea

Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats

Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

Biofilm plasmids with a rhamnose operon are widely distributed determinants of the ‘swim-or-stick’ lifestyle in roseobacters

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