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Showing 351–400 of 1965 results
Advanced filters: Author: Matthew D Smith Clear advanced filters
  • Post-traumatic stress disorder (PTSD) is a common mental health problem. Here, the authors report a GWAS from the Psychiatric Genomics Consortium in which they identify two risk loci in European ancestry and one locus in African ancestry individuals and find that PTSD is genetically correlated with several other psychiatric traits.

    • Caroline M. Nievergelt
    • Adam X. Maihofer
    • Karestan C. Koenen
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-16
  • The impact of the DART spacecraft on the asteroid Dimorphos is reported and reconstructed, demonstrating that kinetic impactor technology is a viable technique to potentially defend Earth from asteroids.

    • R. Terik Daly
    • Carolyn M. Ernst
    • Yun Zhang
    ResearchOpen Access
    Nature
    Volume: 616, P: 443-447
  • Analyses of multiregional tumour samples from 421 patients with non-small cell lung cancer prospectively enrolled to the TRACERx study reveal determinants of tumour evolution and relationships between intratumour heterogeneity and clinical outcome.

    • Alexander M. Frankell
    • Michelle Dietzen
    • Charles Swanton
    ResearchOpen Access
    Nature
    Volume: 616, P: 525-533
  • Lee et al. show that DMXL1, a regulator of V-ATPase assembly, is recruited to lysosomes upon TRPML1 activation in a manner dependent on conjugation of ATG8 proteins on lysosomal membranes (CASM) and promotes lysosomal function.

    • Chan Lee
    • Matthew J. G. Eldridge
    • J. Wade Harper
    ResearchOpen Access
    Nature Structural & Molecular Biology
    Volume: 32, P: 2060-2075
  • Timothy Frayling, Joel Hirschhorn, Peter Visscher and colleagues report a meta-analysis of genome-wide association studies for adult height in 253,288 individuals. They identify 697 variants in 423 loci significantly associated with adult height and find that these variants cluster in pathways involved in growth and together explain one-fifth of the heritability for this trait.

    • Andrew R Wood
    • Tonu Esko
    • Timothy M Frayling
    Research
    Nature Genetics
    Volume: 46, P: 1173-1186
  • Inversion of the mouse α-globin super-enhancer reverses expression and interaction profiles of flanking genes. Contrary to the orientation-independent paradigm of enhancers, this super-enhancer acts in an orientation-dependent manner.

    • Mira T. Kassouf
    • Helena S. Francis
    • Douglas R. Higgs
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Levantine Phoenicians made little genetic contribution to Punic settlements in the central and western Mediterranean between the sixth and second centuries bce; instead, the Punic people derived most of their ancestry from a genetic profile similar to that of Sicily and the Aegean, with notable contributions from North Africa as well.

    • Harald Ringbauer
    • Ayelet Salman-Minkov
    • David Reich
    Research
    Nature
    Volume: 643, P: 139-147
  • Grockowiak et al. explore bone marrow niche heterogeneity in myeloproliferative neoplasms, polycytemia vera and essential thrombocytemia and find JAK2-mutated hematopoietic stem cells occupying distinct niches affecting cell growth and therapy response.

    • Elodie Grockowiak
    • Claudia Korn
    • Simón Méndez-Ferrer
    ResearchOpen Access
    Nature Cancer
    Volume: 4, P: 1193-1209
  • GPAT1 is a mitochondrial outer membrane protein that catalyzes the first step of glycerolipid biosynthesis. Cryo-EM structures and functional studies of human GPAT1 uncover the molecular architecture and mechanism of this important acyltransferase.

    • Zachary Lee Johnson
    • Mark Ammirati
    • Huixian Wu
    Research
    Nature Structural & Molecular Biology
    Volume: 30, P: 22-30
  • A region on chromosome 19p13 is associated with the risk of developing ovarian and breast cancer. Here, the authors genotyped SNPs in this region in thousands of breast and ovarian cancer patients and identified SNPs associated with three genes, which were analysed with functional studies.

    • Kate Lawrenson
    • Siddhartha Kar
    • Simon A. Gayther
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-22
  • The docking of a 1.7 billion- versus a 99 million-molecule virtual library against β-lactamase revealed that the larger-sized library produced improved hit rates and potency along with an increased number of scaffolds.

    • Fangyu Liu
    • Olivier Mailhot
    • Brian K. Shoichet
    Research
    Nature Chemical Biology
    Volume: 21, P: 1039-1045
  • Vaccination is effective in protecting from COVID-19. Here the authors report immune responses and breakthrough infections in twice-vaccinated patients receiving anti-TNF treatments for inflammatory bowel disease, and find dampened vaccine responses that implicate the need of adapted vaccination schedules for these patients.

    • Simeng Lin
    • Nicholas A. Kennedy
    • Jeannie Bishop
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • A genome-wide study by the Long COVID Host Genetics Initiative identifies an association between the FOXP4 locus and long COVID, implicating altered lung function in its pathophysiology.

    • Vilma Lammi
    • Tomoko Nakanishi
    • Hanna M. Ollila
    ResearchOpen Access
    Nature Genetics
    Volume: 57, P: 1402-1417
  • Genome-wide association studies have identified regions which confer risk of high-grade serous epithelial ovarian cancer. Here the authors use expression quantitative train locus analysis to identify candidate genes and functionally characterise them, identifying a role for HOXD9 in ovarian cancer.

    • Kate Lawrenson
    • Qiyuan Li
    • Matthew L. Freedman
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-14
  • Gloger's rule describes how the colouring of animals darkens the closer to the equator they live. Similar global trends have not been observed in plants. Here Gloger's rule holds for the variation of UV pigments in silverweed (Argentina anserine).

    • Matthew H. Koski
    • Tia-Lynn Ashman
    Research
    Nature Plants
    Volume: 1, P: 1-5
  • Antibiotic resistance is biologically driven by antibiotic use but other social, environmental, demographic, economic and behavioural factors also contribute. Here, the authors conduct a cross-sectional study to identify risk factors jointly associated with multidrug resistant urinary tract infection in East Africa.

    • Katherine Keenan
    • Michail Papathomas
    • John Stelling
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11
  • A detailed parcellation (map) of the human cerebral cortex has been obtained by integrating multi-modal imaging data, including functional magnetic resonance imaging (fMRI), and the resulting freely available resources will enable detailed comparative studies of the human brain in health, ageing and disease.

    • Matthew F. Glasser
    • Timothy S. Coalson
    • David C. Van Essen
    Research
    Nature
    Volume: 536, P: 171-178
  • Many published studies of the current SARS-CoV-2 pandemic have analysed data from non-representative samples from populations. Here, using UK BioBank samples, Gibran Hemani and colleagues discuss the potential for such studies to suffer from collider bias, and provide suggestions for optimising study design to account for this.

    • Gareth J. Griffith
    • Tim T. Morris
    • Gibran Hemani
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Matthew Law, Mark Iles and colleagues report the results of a large-scale genome-wide meta-analysis of cutaneous malignant melanoma. They confirm previously reported association signals and identify five new susceptibility loci, with associated variants mapping within putative melanocyte regulatory elements.

    • Matthew H Law
    • D Timothy Bishop
    • Mark M Iles
    Research
    Nature Genetics
    Volume: 47, P: 987-995
  • Identification of the Palaeocene/Eocene thermal maximum in a marine sedimentary sequence shows that sea surface temperatures near the North Pole increased from roughly 18 degrees Celsius to over 23 degrees Celsius — such warm values imply the absence of ice and thus exclude the influence of ice-albedo feedbacks on this Arctic warming.

    • Appy Sluijs
    • Stefan Schouten
    • Kathryn Moran
    Research
    Nature
    Volume: 441, P: 610-613
  • Singlet fission is an important process occurring in solar cells, however the mechanism is not well understood. Here the authors reveal intermediates during singlet fission of a non-conjugated pentacene dimer, developing a single kinetic model to describe the data over seven temporal orders of magnitude at room and cryogenic temperatures.

    • Bettina S. Basel
    • Johannes Zirzlmeier
    • Dirk M. Guldi
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-8
  • A multiomic approach profiles the three-dimensional, epigenetic and mutational landscapes of 80 metastatic prostate cancer biopsies. Hi-C experiments identify an extrachromosomal circular DNA at the AR locus associated with therapy resistance.

    • Shuang G. Zhao
    • Matthew Bootsma
    • Felix Y. Feng
    ResearchOpen Access
    Nature Genetics
    Volume: 56, P: 1689-1700
  • RNA sequencing data and tumour pathology observations of non-small-cell lung cancers indicate that the immune cell microenvironment exerts strong evolutionary selection pressures that shape the immune-evasion capacity of tumours.

    • Rachel Rosenthal
    • Elizabeth Larose Cadieux
    • Andrew Kidd
    Research
    Nature
    Volume: 567, P: 479-485
  • Enterococci enhance the fitness and pathogenesis of Clostridioides difficile in the gut by altering the amino acid composition and providing signals that increase its virulence towards the host.

    • Alexander B. Smith
    • Matthew L. Jenior
    • Joseph P. Zackular
    Research
    Nature
    Volume: 611, P: 780-786
  • Whipworms are large parasites causing chronic disease in humans and other mammals. Here, the authors show how larvae create tunnels inside the gut lining and reveal the early host response to infection via Isg15 in mice and murine caecaloids.

    • María A. Duque-Correa
    • David Goulding
    • Matthew Berriman
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • Efficiency improvements that cause price decreases and consumption increases may offset the benefits of avoided food loss and waste (FLW), hindering progress towards SDG 12. Based on published income-group- and food-type-specific price elasticities of supply and demand, this study quantifies the direct rebound effects from large reductions in FLW of six types of food.

    • Margaret Hegwood
    • Matthew G. Burgess
    • Steven J. Davis
    Research
    Nature Food
    Volume: 4, P: 585-595
  • The pathogen Salmonella Typhimurium increases production of outer membrane vesicles (OMVs) inside acidic vacuoles of host cells, but the mechanisms are unclear. Here, Dehinwal et al. show that acidic pH induces conformational changes in an outer membrane protein that affect its interaction with membrane lipids, thus modulating OMV formation.

    • Ruchika Dehinwal
    • Tata Gopinath
    • Francesca M. Marassi
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-10
  • Corals have evolved as finely tuned light collectors. Here, the authors report on the 3D printing of coral-inspired biomaterials, that mimic the coral-algal symbiosis; these bionic corals lead to dense microalgal growth and can find applications in algal biotechnology and applied coral science.

    • Daniel Wangpraseurt
    • Shangting You
    • Silvia Vignolini
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-8
  • The inhibition of bacterial glycosyltransferase has the potential to be an effective therapeutic target against drug resistance bacteria. Here, the authors present a novel class of inhibitor compounds based on a monosaccharide scaffold, which are able to eliminate bacterial infections in mice.

    • Johannes Zuegg
    • Craig Muldoon
    • Matthew A. Cooper
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-11
  • Bioinformatic analysis coupled to substrate-reactivity profiling for the glycosyltransferase (GT) enzyme superfamily supports the development of ‘GT-Predict’ as a tool for functional prediction of GT–substrate relationships.

    • Min Yang
    • Charlie Fehl
    • Benjamin G. Davis
    Research
    Nature Chemical Biology
    Volume: 14, P: 1109-1117
  • Genome-wide analysis identifies variants associated with the volume of seven different subcortical brain regions defined by magnetic resonance imaging. Implicated genes are involved in neurodevelopmental and synaptic signaling pathways.

    • Claudia L. Satizabal
    • Hieab H. H. Adams
    • M. Arfan Ikram
    Research
    Nature Genetics
    Volume: 51, P: 1624-1636
  • An initial draft of the human pangenome is presented and made publicly available by the Human Pangenome Reference Consortium; the draft contains 94 de novo haplotype assemblies from 47 ancestrally diverse individuals.

    • Wen-Wei Liao
    • Mobin Asri
    • Benedict Paten
    ResearchOpen Access
    Nature
    Volume: 617, P: 312-324
  • Blind mole rats are small rodents characterized by an exceptionally long lifespan and resistance to both spontaneous and induced tumorigenesis. Gorbunova and colleagues show that a transposon-triggered innate immune response confers cancer resistance to the blind mole rat.

    • Yang Zhao
    • Ena Oreskovic
    • Vera Gorbunova
    Research
    Nature Immunology
    Volume: 22, P: 1219-1230
  • A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlights cell populations characteristic of these tissue types. Transcriptional and cellular heterogeneity across tissues suggests novel therapeutic targets and biomarkers for this disease.

    • Marcos A. S. Fonseca
    • Marcela Haro
    • Kate Lawrenson
    Research
    Nature Genetics
    Volume: 55, P: 255-267
  • Low read depth sequencing of whole genomes and high read depth exomes of nearly 10,000 extensively phenotyped individuals are combined to help characterize novel sequence variants, generate a highly accurate imputation reference panel and identify novel alleles associated with lipid-related traits; in addition to describing population structure and providing functional annotation of rare and low-frequency variants the authors use the data to estimate the benefits of sequencing for association studies.

    • Klaudia Walter
    • Josine L. Min
    • Weihua Zhang
    ResearchOpen Access
    Nature
    Volume: 526, P: 82-90