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Showing 1–5 of 5 results
Advanced filters: Author: Michael W. Dorrity Clear advanced filters
  • Dimensionality reduction is often used to visualize expression profiling data in order to find relationships among cells. Here, the authors use Uniform Manifold Approximation and Projection (UMAP) on published expression data of gene deletions of S. cerevisiae to find novel protein interactions.

    • Michael W. Dorrity
    • Lauren M. Saunders
    • Cole Trapnell
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-6
  • We present the ‘zebrafish single-cell atlas of perturbed embryos’, single-cell trancriptomic data of developing zebrafish embryos across various timepoints and with genetic perturbations.

    • Lauren M. Saunders
    • Sanjay R. Srivatsan
    • Cole Trapnell
    ResearchOpen Access
    Nature
    Volume: 623, P: 782-791
  • Existing studies of the chromatin accessibility, the primary mark of regulatory DNA, in Arabidopsis are based mainly on bulk samples. Here, the authors report the regulatory landscape of Arabidopsis thaliana roots at single-cell resolution.

    • Michael W. Dorrity
    • Cristina M. Alexandre
    • Josh T. Cuperus
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-12