Nature Search

TEtrimmer: a tool to automate the manual curation of transposable elements

Transposons are repetitive DNA sequences that are hard to identify and map accurately. TEtrimmer automates key manual steps, enabling faster and more reliable annotation of transposable elements in any genome.

Jiangzhao Qian
Hang Xue
Ralph Panstruga
ResearchOpen Access25 Sept 2025
Nature Communications

Volume: 16, P: 1-20
Characterising acute and chronic care needs: insights from the Global Burden of Disease Study 2019

Chronic care manages long-term, progressive conditions, while acute care handles short-term ones. Here, authors show chronic conditions account for most of the global health burden, with 68% of DALYs and 93% of YLDs attributed to chronic care needs.

Cecilia Anza-Ramirez
J. Jaime Miranda
Yves Miel H. Zuniga
ResearchOpen Access07 May 2025
Nature Communications

Volume: 16, P: 1-36
Correction: Corrigendum: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach

Hugo J.W.L. Aerts
Emmanuel Rios Velazquez
Philippe Lambin
Amendments and Corrections07 Aug 2014
Nature Communications

Volume: 5, P: 1
Exclusion of RUNX3 as a tumour-suppressor gene in early-onset gastric carcinomas

Ralph Carvalho
Anya N A Milne
Marian A J Weterman
Research01 Aug 2005
Oncogene

Volume: 24, P: 8252-8258
GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19

An analysis of 24,202 critical cases of COVID-19 identifies potentially druggable targets in inflammatory signalling (JAK1), monocyte–macrophage activation and endothelial permeability (PDE4A), immunometabolism (SLC2A5 and AK5), and host factors required for viral entry and replication (TMPRSS2 and RAB2A).

Erola Pairo-Castineira
Konrad Rawlik
J. Kenneth Baillie
ResearchOpen Access17 May 2023
Nature

Volume: 617, P: 764-768
Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach

An individual tumour is often heterogeneous and its various features can be visualised noninvasively using medical imaging. Here, the authors analyse large computed tomography data sets using radiomic algorithms to identify heterogeneity, and find that some of these tumour features have prognostic value across cancer types.

Hugo J. W. L. Aerts
Emmanuel Rios Velazquez
Philippe Lambin
ResearchOpen Access03 Jun 2014
Nature Communications

Volume: 5, P: 1-9
Loss of Heterozygosity and Promoter Methylation, but not Mutation, May Underlie Loss of TFF1 in Gastric Carcinoma

Ralph Carvalho
Tuncay Kayademir
José Carlos Machado
Research01 Oct 2002
Laboratory Investigation

Volume: 82, P: 1319-1326
A control oriented strategy of disruption prediction to avoid the configuration collapse of tokamak reactors

Confining plasma and managing disruptions in tokamak devices is a challenge. Here the authors demonstrate a method predicting and possibly preventing disruptions and macroscopic instabilities in tokamak plasma using data from JET.

Andrea Murari
Riccardo Rossi
Michela Gelfusa
ResearchOpen Access18 Mar 2024
Nature Communications

Volume: 15, P: 1-19
Linking abiotic conditions to mosquito assemblage structure in bromeliads

Antônio Ralph Medeiros-Sousa
Rafael de Oliveira-Christe
Mauro Toledo Marrelli
ResearchOpen Access19 Aug 2025
Scientific Reports

Volume: 15, P: 1-10
RPA shields inherited DNA lesions for post-mitotic DNA synthesis

Single-stranded DNA during DNA replication and repair in S/G2 needs protection by replication protein A (RPA). Here the authors reveal that RPA also shields inherited single-stranded DNA in G1, representing replication remnants from the previous cell cycle, to allow for post-mitotic DNA synthesis.

Aleksandra Lezaja
Andreas Panagopoulos
Matthias Altmeyer
ResearchOpen Access22 Jun 2021
Nature Communications

Volume: 12, P: 1-15
Significantly wetter or drier future conditions for one to two thirds of the world’s population

The authors disentangle uncertainty in rainfall projections, revealing regions where multiple global climate models agree on future drying and wetting patterns with implications for one to two thirds of the world’s population.

Ralph Trancoso
Jozef Syktus
Robin Chadwick
ResearchOpen Access11 Jan 2024
Nature Communications

Volume: 15, P: 1-11
Genomic reconstruction of the SARS-CoV-2 epidemic in England

A study of the evolution of the SARS-CoV-2 virus in England between September 2020 and June 2021 finds that interventions capable of containing previous variants were insufficient to stop the more transmissible Alpha and Delta variants.

Harald S. Vöhringer
Theo Sanderson
Moritz Gerstung
ResearchOpen Access14 Oct 2021
Nature

Volume: 600, P: 506-511
SARS-CoV-2 evolution during treatment of chronic infection

Chronic infection with SARS-CoV-2 leads to the emergence of viral variants that show reduced susceptibility to neutralizing antibodies in an immunosuppressed individual treated with convalescent plasma.

Steven A. Kemp
Dami A. Collier
Ravindra K. Gupta
Research05 Feb 2021
Nature

Volume: 592, P: 277-282
Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

Sera from vaccinated individuals and some monoclonal antibodies show a modest reduction in neutralizing activity against the B.1.1.7 variant of SARS-CoV-2; but the E484K substitution leads to a considerable loss of neutralizing activity.

Dami A. Collier
Anna De Marco
Ravindra K. Gupta
Research11 Mar 2021
Nature

Volume: 593, P: 136-141
The effect of SUV discretization in quantitative FDG-PET Radiomics: the need for standardized methodology in tumor texture analysis

Ralph T.H. Leijenaar
Georgi Nalbantov
Philippe Lambin
ResearchOpen Access05 Aug 2015
Scientific Reports

Volume: 5, P: 1-10
Enhanced performance in fusion plasmas through turbulence suppression by megaelectronvolt ions

Experiments at the Joint European Torus tokamak show improved thermal ion confinement in the presence of highly energetic ions and Alfvénic instabilities in the plasma.

S. Mazzi
J. Garcia
I. Zychor
Research30 Jun 2022
Nature Physics

Volume: 18, P: 776-782
A simple dynamic model explains the diversity of island birds worldwide

Using a global molecular phylogenetic dataset of birds on islands, the sensitivity of island-specific rates of colonization, speciation and extinction to island features (area and isolation) is estimated.

Luis Valente
Albert B. Phillimore
Rampal S. Etienne
Research19 Feb 2020
Nature

Volume: 579, P: 92-96
Confirmation of the topology of the Wendelstein 7-X magnetic field to better than 1:100,000

Early stellarator designs suffered from high particle losses, an issue that can be addressed by optimization of the coils. Here the authors measure the magnetic field lines in the Wendelstein 7-X stellarator, confirming that the complicated design of the superconducting coils has been realized successfully.

T. Sunn Pedersen
M. Otte
Sandor Zoletnik
ResearchOpen Access30 Nov 2016
Nature Communications

Volume: 7, P: 1-10
Observation of the rare B_s⁰ →µ⁺µ⁻ decay from the combined analysis of CMS and LHCb data

Combined analysis of proton-proton collision data from the Large Hadron Collider at CERN by the CMS and LHCb collaborations leads to the observation of the extremely rare decay of the strange B meson into muons; the result is compatible with the standard model of particle physics, and does not show any signs of new physics, such as supersymmetry.

V. Khachatryan
A.M. Sirunyan
E. Pesen
ResearchOpen Access13 May 2015
Nature

Volume: 522, P: 68-72
Author Correction: GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19

Erola Pairo-Castineira
Konrad Rawlik
J. Kenneth Baillie
Amendments and CorrectionsOpen Access11 Jul 2023
Nature

Volume: 619, P: E61
Disruption prediction with artificial intelligence techniques in tokamak plasmas

Tokamak plasmas are prone to sudden collapses that terminate the nuclear fusion reactions. This perspective discusses the prediction of these so-called disruptions with artificial intelligence techniques.

J. Vega
A. Murari
I. Zychor
Reviews06 Jun 2022
Nature Physics

Volume: 18, P: 741-750
Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England

Harald S. Vöhringer
Theo Sanderson
Moritz Gerstung
Amendments and CorrectionsOpen Access07 Jun 2022
Nature

Volume: 606, P: E18
Early-onset gastric cancers have a different molecular expression profile than conventional gastric cancers

Anya N A Milne
Ralph Carvalho
G Johan A Offerhaus
Research10 Feb 2006
Modern Pathology

Volume: 19, P: 564-572
Author Correction: Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

Dami A. Collier
Anna De Marco
Ravindra K. Gupta
Amendments and Corrections21 Jul 2022
Nature

Volume: 608, P: E24
Author Correction: SARS-CoV-2 evolution during treatment of chronic infection

Steven A. Kemp
Dami A. Collier
Ravindra K. Gupta
Amendments and Corrections21 Jul 2022
Nature

Volume: 608, P: E23
Gene expression alterations in the non-neoplastic parenchyma adjacent to infiltrating pancreatic ductal adenocarcinoma

Noriyoshi Fukushima
Jens Koopmann
Michael Goggins
Research25 Mar 2005
Modern Pathology

Volume: 18, P: 779-787

Search

TEtrimmer: a tool to automate the manual curation of transposable elements

Characterising acute and chronic care needs: insights from the Global Burden of Disease Study 2019

Correction: Corrigendum: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach

Exclusion of RUNX3 as a tumour-suppressor gene in early-onset gastric carcinomas

GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19

Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach

Loss of Heterozygosity and Promoter Methylation, but not Mutation, May Underlie Loss of TFF1 in Gastric Carcinoma

A control oriented strategy of disruption prediction to avoid the configuration collapse of tokamak reactors

Linking abiotic conditions to mosquito assemblage structure in bromeliads

RPA shields inherited DNA lesions for post-mitotic DNA synthesis

Significantly wetter or drier future conditions for one to two thirds of the world’s population

Genomic reconstruction of the SARS-CoV-2 epidemic in England

SARS-CoV-2 evolution during treatment of chronic infection

Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

The effect of SUV discretization in quantitative FDG-PET Radiomics: the need for standardized methodology in tumor texture analysis

Enhanced performance in fusion plasmas through turbulence suppression by megaelectronvolt ions

A simple dynamic model explains the diversity of island birds worldwide

Confirmation of the topology of the Wendelstein 7-X magnetic field to better than 1:100,000

Observation of the rare B_s⁰ →µ⁺µ⁻ decay from the combined analysis of CMS and LHCb data

Author Correction: GWAS and meta-analysis identifies 49 genetic variants underlying critical COVID-19

Disruption prediction with artificial intelligence techniques in tokamak plasmas

Publisher Correction: Genomic reconstruction of the SARS CoV-2 epidemic in England

Early-onset gastric cancers have a different molecular expression profile than conventional gastric cancers

Author Correction: Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

Author Correction: SARS-CoV-2 evolution during treatment of chronic infection

Gene expression alterations in the non-neoplastic parenchyma adjacent to infiltrating pancreatic ductal adenocarcinoma

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