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Showing 1–50 of 86 results
Advanced filters: Author: Sabrina Adam Clear advanced filters
  • Designing synthetic biomolecular condensates offers biological insights and is valuable for cellular and metabolic engineering. Here, the authors express orthogonal, unnatural condensates with protein binding aptamers in E. coli, which can dissolve and reassemble upon thermal cycling.

    • Brian Ng
    • Catherine Fan
    • Lorenzo Di Michele
    ResearchOpen Access
    Nature Communications
    P: 1-16
  • Expression of ADAM8, a metalloprotease disintegrin, correlates with worse prognosis in pancreatic adenocarcinoma (PDAC). Here Schlomann et al. show that ADAM8 promotes PDAC invasiveness, and develop a peptide inhibitor that blocks ADAM8 function and impedes PDAC progression in mouse models.

    • Uwe Schlomann
    • Garrit Koller
    • Jörg W. Bartsch
    Research
    Nature Communications
    Volume: 6, P: 1-16
  • Tissue phenotypes arise from molecular states of individual cells and their spatial organisation, so spatial omics assays can help reveal how they emerge. Here, the authors apply graph neural networks to classify tissue phenotypes from spatial omics patterns, and use this approach to understand patterns in cancers and their microenvironments.

    • Mayar Ali
    • Sabrina Richter
    • Fabian J. Theis
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • What is the state of trust in scientists around the world? To answer this question, the authors surveyed 71,922 respondents in 68 countries and found that trust in scientists is moderately high.

    • Viktoria Cologna
    • Niels G. Mede
    • Rolf A. Zwaan
    ResearchOpen Access
    Nature Human Behaviour
    Volume: 9, P: 713-730
  • Whole-genome sequencing, transcriptome-wide association and fine-mapping analyses in over 7,000 individuals with critical COVID-19 are used to identify 16 independent variants that are associated with severe illness in COVID-19.

    • Athanasios Kousathanas
    • Erola Pairo-Castineira
    • J. Kenneth Baillie
    ResearchOpen Access
    Nature
    Volume: 607, P: 97-103
  • Literature produced inconsistent findings regarding the links between extreme weather events and climate policy support across regions, populations and events. This global study offers a holistic assessment of these relationships and highlights the role of subjective attribution.

    • Viktoria Cologna
    • Simona Meiler
    • Amber Zenklusen
    ResearchOpen Access
    Nature Climate Change
    Volume: 15, P: 725-735
  • Experimental measurements of high-order out-of-time-order correlators on a superconducting quantum processor show that these correlators remain highly sensitive to the quantum many-body dynamics in quantum computers at long timescales.

    • Dmitry A. Abanin
    • Rajeev Acharya
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 646, P: 825-830
  • Neutral helium microscopy is a completely nondestructive, surface-sensitive imaging technique. Here, the authors demonstrate sub-resolution contrast using an advanced facet scattering model to reconstruct the topography of technological thin films in the ångström range.

    • Sabrina D. Eder
    • Adam Fahy
    • Paul C. Dastoor
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-10
  • Mastomys natalensis, a mouse found closely to rural human dwellings in Sub-Saharan Africa, is a major reservoir for Lassa Virus (LASV). Here, the authors show that LASV causes transient infections in adult M. natalensis, but persistent infections in young animals despite antibodies. LASV is found in various organs without causing pathology and infected animals efficiently transmit the virus.

    • Chris Hoffmann
    • Susanne Krasemann
    • Lisa Oestereich
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Whole-genome alignment of 239 primate species reveals noncoding regulatory elements that are under selective constraint in primates but not in other placental mammals, that are enriched for variants that affect human gene expression and complex traits in diseases.

    • Lukas F. K. Kuderna
    • Jacob C. Ulirsch
    • Kyle Kai-How Farh
    ResearchOpen Access
    Nature
    Volume: 625, P: 735-742
  • Chronic infection with SARS-CoV-2 leads to the emergence of viral variants that show reduced susceptibility to neutralizing antibodies in an immunosuppressed individual treated with convalescent plasma.

    • Steven A. Kemp
    • Dami A. Collier
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 592, P: 277-282
  • Sera from vaccinated individuals and some monoclonal antibodies show a modest reduction in neutralizing activity against the B.1.1.7 variant of SARS-CoV-2; but the E484K substitution leads to a considerable loss of neutralizing activity.

    • Dami A. Collier
    • Anna De Marco
    • Ravindra K. Gupta
    Research
    Nature
    Volume: 593, P: 136-141
  • Meta-analysis of genome-wide association studies on Alzheimer’s disease and related dementias identifies new loci and enables generation of a new genetic risk score associated with the risk of future Alzheimer’s disease and dementia.

    • Céline Bellenguez
    • Fahri Küçükali
    • Jean-Charles Lambert
    ResearchOpen Access
    Nature Genetics
    Volume: 54, P: 412-436
  • BPNet is an interpretable deep learning tool that predicts transcription-factor binding profiles from DNA sequence at base-pair resolution, enabling the identification of motifs and the regulatory syntax underlying transcription-factor binding.

    • Žiga Avsec
    • Melanie Weilert
    • Julia Zeitlinger
    Research
    Nature Genetics
    Volume: 53, P: 354-366
  • An antibody screen of two distinct multiple sclerosis cohorts reveals an autoantibody signature that is detectable years before symptom onset and linked to a common microbial motif.

    • Colin R. Zamecnik
    • Gavin M. Sowa
    • Michael R. Wilson
    Research
    Nature Medicine
    Volume: 30, P: 1300-1308
  • Non-covalent interactions facilitate the stacking of framework layers in two dimensional covalent organic frameworks playing an important role for the framework formation. Here, the authors describe a covalent organic framework with tetratopic borate linkages whose counter cations promote the framework layer interaction.

    • Darosch Asgari
    • Julia Grüneberg
    • Arne Thomas
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-9
  • Single-cell transcriptomics and protein expression analyses of salivary glands and gingiva, along with the detection of infectious virus and virus-specific antibodies in saliva from SARS-CoV-2-infected individuals, support a potential role for the oral cavity in COVID-19 pathogenesis.

    • Ni Huang
    • Paola Pérez
    • Kevin M. Byrd
    Research
    Nature Medicine
    Volume: 27, P: 892-903
  • Insufficient AHR activation has been suggested in SLE, and augmenting AHR activation therapeutically may prevent CXCL13+ TPH/TFH differentiation and the subsequent recruitment of B cells and formation of lymphoid aggregates in inflamed tissues.

    • Calvin Law
    • Vanessa Sue Wacleche
    • Deepak A. Rao
    Research
    Nature
    Volume: 631, P: 857-866
  • Whole-genome sequencing in a Canadian cohort of 327 children with cerebral palsy compared to pediatric controls identifies novel pathogenic single-nucleotide variants/indels and copy number variations. In addition, mitochondrial variants in known disease genes were identified. This highlights the importance of genomic testing for individuals with cerebral palsy.

    • Darcy L. Fehlings
    • Mehdi Zarrei
    • Stephen W. Scherer
    Research
    Nature Genetics
    Volume: 56, P: 585-594
  • Genomic comparison of E. coli and K. pneumoniae isolated from faeces and blood of the same neonatal patients revealed highly related pairs, suggesting translocation between the gastrointestinal tract and the bloodstream occurred in multiple patients.

    • Richard N. Goodman
    • Sabrina J. Moyo
    • Adam P. Roberts
    ResearchOpen Access
    Communications Biology
    Volume: 8, P: 1-13
  • Physical realizations of qubits are often vulnerable to leakage errors, where the system ends up outside the basis used to store quantum information. A leakage removal protocol can suppress the impact of leakage on quantum error-correcting codes.

    • Kevin C. Miao
    • Matt McEwen
    • Yu Chen
    ResearchOpen Access
    Nature Physics
    Volume: 19, P: 1780-1786
  • Sabrina Adam et al. use a deep enzymology method to study the effect of neighboring DNA sequence variation on the in vitro activity of Tet1 and Tet2. Their results suggest that flanking sequences could represent an important parameter that influences genomic DNA modification patterns.

    • Sabrina Adam
    • Julia Bräcker
    • Albert Jeltsch
    ResearchOpen Access
    Communications Biology
    Volume: 5, P: 1-13
  • In mammals, DNA methylation patterns are established by two de novo DNA methyltransferases, DNMT3A and DNMT3B. Here the authors report the crystal structures of DNMT3B in complex with both CpG and CpA DNA, providing insight into the substrate-recognition mechanism underpinning the divergent genomic methylation activities of DNMT3A and DNMT3B.

    • Linfeng Gao
    • Max Emperle
    • Jikui Song
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Watson et al. demonstrate that astrocyte mitochondria can be horizontally transferred to glioblastoma cells in a GAP43-dependent manner, leading to changes in mitochondrial respiration and metabolism that promote proliferation and tumor growth.

    • Dionysios C. Watson
    • Defne Bayik
    • Justin D. Lathia
    ResearchOpen Access
    Nature Cancer
    Volume: 4, P: 648-664
  • A study of SARS-CoV-2 variants examining their transmission, infectivity, and potential resistance to therapies provides insights into the biology of the Delta variant and its role in the global pandemic.

    • Petra Mlcochova
    • Steven A. Kemp
    • Ravindra K. Gupta
    ResearchOpen Access
    Nature
    Volume: 599, P: 114-119
  • Investigations of human cardiac disease involving human pluripotent stem cell-derived cardiomyocytes are limited by the disorganized presentation of biomechanical cues resulting in cell immaturity. Here the authors develop a platform of micron-scale 2D cardiac muscle bundles to precisely deliver physiologic cues, improving reproducibility and throughput.

    • Yao-Chang Tsan
    • Samuel J. DePalma
    • Adam S. Helms
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-16
  • Designing reliable nanoscale quantum-heat engines achieving high efficiency, high power and high stability is of fundamental and practical interest. Here, the authors report the realization of such a quantum machine using individual neutral Cs atoms in an atomic Rb bath, in which quantized heat exchange via inelastic spin-exchange collisions is controlled at the level of single quanta.

    • Quentin Bouton
    • Jens Nettersheim
    • Artur Widera
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-7
  • A study establishes a scalable approach to engineer and characterize a many-body-localized discrete time crystal phase on a superconducting quantum processor.

    • Xiao Mi
    • Matteo Ippoliti
    • Pedram Roushan
    ResearchOpen Access
    Nature
    Volume: 601, P: 531-536
  • It is hoped that quantum computers may be faster than classical ones at solving optimization problems. Here the authors implement a quantum optimization algorithm over 23 qubits but find more limited performance when an optimization problem structure does not match the underlying hardware.

    • Matthew P. Harrigan
    • Kevin J. Sung
    • Ryan Babbush
    Research
    Nature Physics
    Volume: 17, P: 332-336
  • Ludmila Prokunina-Olsson, Thomas O'Brien and colleagues report the discovery of a new gene, INFL4, encoding interferon-λ4, that is upstream of INFL3 (IL28B). A compound dinucleotide frameshift genetic variant in INFL4 creates the full-length INFL4 protein and is more strongly associated with hepatitis C virus clearance in individuals of African ancestry than rs12979860, a known variant associated with clearance.

    • Ludmila Prokunina-Olsson
    • Brian Muchmore
    • Thomas R O'Brien
    Research
    Nature Genetics
    Volume: 45, P: 164-171
  • Two below-threshold surface code memories on superconducting processors markedly reduce logical error rates, achieving high efficiency and real-time decoding, indicating potential for practical large-scale fault-tolerant quantum algorithms.

    • Rajeev Acharya
    • Dmitry A. Abanin
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 638, P: 920-926
  • Humans are better than computers at performing certain tasks because of their intuition and superior visual processing. Video games are now being used to channel these abilities to solve problems in quantum physics. See Letter p.210

    • Sabrina Maniscalco
    News & Views
    Nature
    Volume: 532, P: 184-185
  • Individuals over eighty years of age are less likely to mount a good immune response against SARS-CoV-2 (measured by neutralization titres) after the first dose of the BNT162b2 mRNA vaccine, but achieve good neutralization after the second dose.

    • Dami A. Collier
    • Isabella A. T. M. Ferreira
    • Ravindra K. Gupta
    ResearchOpen Access
    Nature
    Volume: 596, P: 417-422
  • Here the authors characterize structural variations (SVs) in a cohort of individuals with complex genomic rearrangements, identifying breakpoints by employing short- and long-read genome sequencing and investigate their impact on gene expression and the three-dimensional chromatin architecture. They find breakpoints are enriched in inactive regions and can result in chromatin domain fusions.

    • Robert Schöpflin
    • Uirá Souto Melo
    • Stefan Mundlos
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • Anaplastic oligodendrogliomas are rare and incurable primary brain tumours with few treatment options. Here Labrecheet al. perform whole-exome sequencing and identify recurring mutations in transcription factor TCF12, which are associated with aggressive tumours.

    • Karim Labreche
    • Iva Simeonova
    • Michel Wager
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-9
  • Vaccination is effective in protecting from COVID-19. Here the authors report immune responses and breakthrough infections in twice-vaccinated patients receiving anti-TNF treatments for inflammatory bowel disease, and find dampened vaccine responses that implicate the need of adapted vaccination schedules for these patients.

    • Simeng Lin
    • Nicholas A. Kennedy
    • Jeannie Bishop
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • Sven van der Lee, Julie Williams, Gerard Schellenberg and colleagues identify rare coding variants in PLCG2, ABI3 and TREM2 associated with Alzheimer's disease. These genes are highly expressed in microglia and provide additional evidence that the microglia-mediated immune response contributes to the development of Alzheimer's disease.

    • Rebecca Sims
    • Sven J van der Lee
    • Gerard D Schellenberg
    Research
    Nature Genetics
    Volume: 49, P: 1373-1384