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Showing 1–4 of 4 results
Advanced filters: Author: Srinivas Aluru Clear advanced filters
  • Brassinosteroid (BR) signalling regulates plant development via the BES1/BZR1 family of transcription factors. Here the authors show that BES1 activity can be modified by the drought-responsive RD26 transcription factor providing a molecular basis for the interaction between drought and BR signalling.

    • Huaxun Ye
    • Sanzhen Liu
    • Yanhai Yin
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-13
  • Average Nucleotide Identity (ANI) is a robust and useful measure to gauge genetic relatedness between two genomes. Here, the authors develop FastANI, a method to compute ANI using alignment-free approximate sequence mapping, and show 95% ANI is an accurate threshold for demarcating prokaryotic species by analyzing about 90,000 prokaryotic genomes.

    • Chirag Jain
    • Luis M. Rodriguez-R
    • Srinivas Aluru
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-8
  • As studies continue sequencing with deeper coverage, computational processing of these profiles has become increasingly resource consuming. Here the authors designed an efficient computational method called Chromap to align and preprocess high throughput sequencing data from chromatin profiling techniques, including ChIP-seq, Hi-C, or scATAC-seq, with a major decrease in runtime.

    • Haowen Zhang
    • Li Song
    • Heng Li
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-6