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Chromosome-level genome assembly of an endoparasitoid Cotesia ruficrus

Xianxin Zhao
Yuanyuan Liu
Gongyin Ye
ResearchOpen Access26 Mar 2025
Scientific Data

Volume: 12, P: 1-8
Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps

Parasitoid wasps are rapidly developing as a model for evolutionary biology. Here, the authors analyze the genomes of two Anastatus wasps, revealing genomic innovations related to maintenance of genomic stability, and rapid turnover of venom genes.

Xinhai Ye
Yi Yang
Gongyin Ye
ResearchOpen Access27 Oct 2022
Nature Communications

Volume: 13, P: 1-17
Self-inspired learning for denoising live-cell super-resolution microscopy

SN2N, a Self-inspired Noise2Noise module, offers a versatile solution for volumetric time-lapse super-resolution imaging of live cells. SN2N uses self-supervised data generation and self-constrained learning for training with a single noisy frame.

Liying Qu
Shiqun Zhao
Weisong Zhao
Research11 Sept 2024
Nature Methods

Volume: 21, P: 1895-1908
Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma

Huanming Yang, Zhiming Cai, Jun Wang and colleagues report whole-exome sequencing of 10 clear cell renal cell carcinomas followed by a screen of ~1,100 genes in a total of 98 tumors. They found 12 new disease-associated genes and detected frequent alterations in the ubiquitin-mediated proteolysis pathway.

Guangwu Guo
Yaoting Gui
Jun Wang
Research04 Dec 2011
Nature Genetics

Volume: 44, P: 17-19
Bright and stable monomeric green fluorescent protein derived from StayGold

mBaoJin is a monomeric derivative of the bright and photostable green fluorescent protein StayGold. mBaoJin offers favorable photophysical properties for use in diverse protein tagging and subcellular labeling applications.

Hanbin Zhang
Gleb D. Lesnov
Fedor V. Subach
Research26 Feb 2024
Nature Methods

Volume: 21, P: 657-665
A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance

The codling moth, Cydia pomonella, is one of the major pests of pome fruit (apples and pears) and walnuts. Here, the authors sequence and analyze its genome, providing insights on olfactory and detoxification processes that may underlie its worldwide expansion.

Fanghao Wan
Chuanlin Yin
Fei Li
ResearchOpen Access17 Sept 2019
Nature Communications

Volume: 10, P: 1-14
Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder

Zhiming Cai and colleagues report the exome sequencing of tumor and matched normal tissue from nine transitional cell carcinomas (TCCs) of the bladder, with further screening in 88 additional subjects. The authors identify mutations in chromatin remodeling genes in 59% of the 97 TCC subjects.

Yaoting Gui
Guangwu Guo
Zhiming Cai
Research07 Aug 2011
Nature Genetics

Volume: 43, P: 875-878
Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation

Zhiming Cai and colleagues report whole-genome and whole-exome sequencing of 99 paired tumor-normal samples of transitional cell carcinoma of the bladder. They find that 32% of tumors harbor alterations in genes involved in sister chromatid cohesion, including STAG2, ESPL1, NIPBL, SMC1A and SMC3.

Guangwu Guo
Xiaojuan Sun
Zhiming Cai
Research13 Oct 2013
Nature Genetics

Volume: 45, P: 1459-1463

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Chromosome-level genome assembly of an endoparasitoid Cotesia ruficrus

Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps

Self-inspired learning for denoising live-cell super-resolution microscopy

Frequent mutations of genes encoding ubiquitin-mediated proteolysis pathway components in clear cell renal cell carcinoma

Bright and stable monomeric green fluorescent protein derived from StayGold

A chromosome-level genome assembly of Cydia pomonella provides insights into chemical ecology and insecticide resistance

Frequent mutations of chromatin remodeling genes in transitional cell carcinoma of the bladder

Whole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation

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