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Showing 1–8 of 8 results

Advanced filters: Author: Ziyin Ren Clear advanced filters

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

The authors here show that chromatin interactions during mouse fetal development are spatiotemporally dynamic. Integrating interactomes with other datasets predicts target genes for candidate enhancers and helps interpret noncoding risk variants in the human genome.

Miao Yu
Nathan R. Zemke
Bing Ren
ResearchOpen Access16 Dec 2024
Nature Structural & Molecular Biology

Volume: 32, P: 479-490
Large-scale Direct Targeting for Drug Repositioning and Discovery

Chunli Zheng
Zihu Guo
Yonghua Wang
ResearchOpen Access09 Jul 2015
Scientific Reports

Volume: 5, P: 1-10
The BRUTUS iron sensor and E3 ligase facilitates soybean root nodulation by monoubiquitination of NSP1

The authors report that iron binds to and stabilizes the iron sensor BRUTUS A (BTSa), which monoubiquitinates the pro-nodulation transcription factor NSP1a to increase its stability and transcriptional activity, thereby regulating nodulation in legumes.

Ziyin Ren
Ling Zhang
Xia Li
Research03 Feb 2025
Nature Plants

Volume: 11, P: 595-611
SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data

SnapHiC offers a computational tool for improving detection of chromatin loops from single-cell Hi-C data.

Miao Yu
Armen Abnousi
Ming Hu
ResearchOpen Access26 Aug 2021
Nature Methods

Volume: 18, P: 1056-1059
The B-type response regulator GmRR11d mediates systemic inhibition of symbiotic nodulation

Cytokinin is essential for regulation of nodulation. Here, the authors identified a B-type response regulator GmRR11d that governs a transcriptional program associated with nodulation and cytokinin activation essential for systemic regulation of nodulation.

Jiahuan Chen
Zhijuan Wang
Xia Li
ResearchOpen Access10 Dec 2022
Nature Communications

Volume: 13, P: 1-17
Deep-sea Sediment Resuspension by Internal Solitary Waves in the Northern South China Sea

Yonggang Jia
Zhuangcai Tian
Jiwei Tian
ResearchOpen Access20 Aug 2019
Scientific Reports

Volume: 9, P: 1-8
Systems pharmacology exploration of botanic drug pairs reveals the mechanism for treating different diseases

Wei Zhou
Jinan Wang
Yonghua Wang
ResearchOpen Access14 Nov 2016
Scientific Reports

Volume: 6, P: 1-17
Author Correction: Deep-sea Sediment Resuspension by Internal Solitary Waves in the Northern South China Sea

Yonggang Jia
Zhuangcai Tian
Jiwei Tian
Amendments and CorrectionsOpen Access21 Nov 2019
Scientific Reports

Volume: 9, P: 1