Table 3 Structure activity relationships of carbon-linked vancapticins
From: Protein-inspired antibiotics active against vancomycin- and daptomycin-resistant bacteria
Structure | MIC (µg mL−1) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Id | MIE | EEPS | Linker | MRSAa | MSSAb | +50% HSc | VISAd | VRSAe | MDR SPf | VREg |
1 | Vancomycin | 1 | 1 | 1 | 4 | >64 | 1 | >64 | ||
2 | Telavancin | 0.06 | nd | 0.5 | 0.25 | 1 | 0.06 | 2 | ||
3 | Dalbavancin | 0.03 | ≤0.016 | 8 | 1 | 16 | 0.09 | >8 | ||
4 | Daptomycin | 2 | 1 | 3 | 12 | 3 | 2 | 16 | ||
5 | Oritavancin | 0.06 | ≤0.016 | 0.5 | 1 | 0.125 | 0.06 | 0.125 | ||
Effect of chirality—EEPS and linker | ||||||||||
24 | POB2Kh | KK | K-NHMe | <0.003 | ≤0.016 | 0.06 | 0.125 | 0.08 | <0.003 | 0.5 |
25 | POB2Kh | kk | K-NHMe | 0.0007 | nd | 0.5 | 0.125 | nd | 0.015 | 2 |
26 | POB2Kh | kK | K-NHMe | <0.003 | nd | 0.25 | 0.19 | nd | <0.003 | 1.5 |
27 | POB2Kh | Kk | K-NHMe | 0.03 | nd | 0.25 | 0.75 | nd | 0.04 | 10 |
28 | POB2Kh | KK | k-NHMe | <0.003 | nd | 0.06 | 0.125 | nd | 0.015 | 0.75 |
Effect of side chain length—EEPS and linker | ||||||||||
24 | POB2Kh | KK | K-NHMe | <0.003 | nd | 0.06 | 0.125 | 0.08 | <0.003 | 0.5 |
27 | POB2Kh | K-Dap | K-NHMe | 0.0045 | nd | 0.375 | 0.0925 | nd | 0.016 | 1.5 |
28 | POB2Kh | Dap-K | K-NHMe | 0.0045 | nd | 0.25 | 0.155 | nd | 0.011 | 0.75 |
29 | POB2Kh | Dap-Dap | K-NHMe | 0.0045 | nd | 0.5 | 0.0925 | nd | 0.0085 | 0.75 |
30 | POB2Kh | K-Dab | K-NHMe | <0.003 | nd | 0.06 | 0.0925 | nd | <0.003 | 0.75 |
31 | POB2Kh | Dab-K | K-NHMe | <0.003 | nd | 0.045 | 0.0925 | nd | <0.003 | 0.375 |
32 | POB2Kh | K-Orn | K-NHMe | <0.003 | nd | 0.19 | 0.0375 | nd | <0.003 | 1 |
33 | POB2Kh | Orn-K | K-NHMe | <0.003 | nd | 0.125 | 0.125 | nd | 0.007 | 1.5 |
34 | POB2Kh | Orn-Orn | K-NHMe | <0.003 | nd | 0.25 | 0.0185 | nd | <0.003 | 0.5 |
35 | POB2Kh | KK | Orn-NHMe | <0.003 | nd | 0.16 | 0.25 | nd | 0.005 | 1.25 |
Effect of MIE on activity | ||||||||||
36 | nC9CO-i | KKK | K-OH | 0.06 | nd | 0.06 | 0.75 | 0.75 | 0.06 | 8 |
18 | nC10CO- | KKK | K-OH | 0.045 | nd | 0.093 | 0.5 | 0.5 | 0.06 | 1.03 |
37 | nC11CO- | KKK | K-OH | 0.005 | nd | 0.03 | 0.06 | 0.75 | <0.003 | 0.5 |
38 | nC12CO- | KKK | K-OH | <0.003 | nd | 0.045 | 0.03 | nd | <0.003 | 0.1875 |
17 | nC13CO- | KKK | K-OH | <0.003 | ≤0.016 | 0.06 | 0.03 | 0.045 | <0.003 | 0.125 |