Table 1 Summary statistics for GIAB sequencing data.

From: Accurate, scalable and integrative haplotype estimation

 

No. of reads (millions)

Mean read length (bp)

Mean insert size (bp)

Mean coverage

%hets phased

Solid5500W

22.13

68

NA

22

9.8

Complete Genomics

132.6

33

282

77

35.1

Illumina HiSeq

13.29

148

546

33

57.9

PacBio

1.04

3707

2048

42

90.1

10x Genomics

22.27

88

194

33

97.7

  1. For each type of sequencing data available for GIAB is given the total number of reads in millions, the mean length of the reads in base pairs, the mean insert size in base pairs, the means coverage, and the percentage of heterozygous genotypes belonging to phase sets
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