Table 6 Identification of W-linked markers in B. mori Whole genome Shotgun (WGS) sequence contigs (BLAST results as on February 15, 2005)

From: Genetic mapping of Z chromosome and identification of W chromosome-specific markers in the silkworm, Bombyx mori

Marker accession no.

Marker

WGS contig

Homology (% Identity, Bit score, and E-value)

Identified sequence (accession no.)

AY566208

Bmsat153

gi∣54081682∣gb∣AADK01028030.1

98%/486nt, 658, and 0.0

B. mandarina Pao-like LTR retrotransposon Yamato DNA, partial sequence (AB055223)

AY566209

Bmsat155

gi∣54071509∣gb∣AADK01038147.1

91%/62nt, 84, and 8e-13

B. mori Bm1 repetitive DNA element

   

90%/145nt, 168, and 2e-38

B. mori non-LTR retrotransposons on chromosome W

AY566210

Bmsat156

gi∣54079028∣gb∣AADK01030684.1

95%/2105nt, 1070, and 0.0

B. mori DNA, clone TREST1, partial cds

AY566212

Bmsat159

gi∣54108487∣gb∣AADK01001225.1

No homology

 
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