Abstract
The inositol 1,4,5-trisphosphate receptor (IP3R) is a major regulator of apoptotic signaling. Through interactions with members of the Bcl-2 family of proteins, it drives calcium (Ca2+) transients from the endoplasmic reticulum (ER) to mitochondria, thereby establishing a functional and physical link between these organelles. Importantly, the IP3R also regulates autophagy, and in particular, its inhibition/depletion strongly induces macroautophagy. Here, we show that the IP3R antagonist xestospongin B induces autophagy by disrupting a molecular complex formed by the IP3R and Beclin 1, an interaction that is increased or inhibited by overexpression or knockdown of Bcl-2, respectively. An effect of Beclin 1 on Ca2+ homeostasis was discarded as siRNA-mediated knockdown of Beclin 1 did not affect cytosolic or luminal ER Ca2+ levels. Xestospongin B- or starvation-induced autophagy was inhibited by overexpression of the IP3R ligand-binding domain, which coimmunoprecipitated with Beclin 1. These results identify IP3R as a new regulator of the Beclin 1 complex that may bridge signals converging on the ER and initial phagophore formation.
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Abbreviations
- ACD:
-
autophagic cell death
- Ambra:
-
activating molecule in Beclin 1-regulated autophagy
- Atg:
-
autophagy-related gene
- Ca2+:
-
calcium
- [Ca2+]:
-
Ca2+ concentration
- [Ca2+]c:
-
cytosolic [Ca2+]
- CFP:
-
cyan fluorescent protein
- cytAEQ:
-
cytosolic aequorin
- Cyto:
-
cytosolic
- ER:
-
endoplasmic reticulum
- FBS:
-
fetal bovine serum
- FRET:
-
fluorescence resonance energy transfer
- GFP:
-
green fluorescent protein
- GFP-LC3:
-
GFP-coupled microtubule-associated protein light chain 3
- IMP:
-
inositol monophosphatase
- IP3:
-
myo-inositol 1,4,5-trisphosphate
- IP3R:
-
IP3 receptor
- LBD:
-
ligand-binding domain
- mTOR:
-
mammalian target of rapamycin
- OMM:
-
outer mitochondrial membrane
- PI3K:
-
phosphatidylinositol 3-kinase
- PI3P:
-
phosphatidylinositol-3-phosphate
- RFP:
-
red fluorescent protein
- SERCA:
-
sarco–endoplasmic reticulum Ca2+ ATPase
- tBHQ:
-
2,5-di(ter-butyl)-1,4 benzohydroquinone
- UVRAG:
-
UV irradiation resistance-associated tumor suppressor gene
- Vps:
-
vacuolar protein sorting
- YFP:
-
yellow fluorescent protein
References
Klionsky DJ . Autophagy: from phenomenology to molecular understanding in less than a decade. Nat Rev Mol Cell Biol 2007; 8: 931–937.
Klionsky DJ, Emr SD . Autophagy as a regulated pathway of cellular degradation. Science 2000; 290: 1717–1721.
Yorimitsu T, Klionsky DJ . Autophagy: molecular machinery for self-eating. Cell Death Differ 2005; 12 (Suppl 2): 1542–1552.
Rubinsztein DC, Gestwicki JE, Murphy LO, Klionsky DJ . Potential therapeutic applications of autophagy. Nat Rev Drug Discov 2007; 6: 304–312.
Klionsky DJ, Cregg JM, Dunn Jr WA, Emr SD, Sakai Y, Sandoval IV et al. A unified nomenclature for yeast autophagy-related genes. Dev Cell 2003; 5: 539–545.
Xie Z, Klionsky DJ . Autophagosome formation: core machinery and adaptations. Nat Cell Biol 2007; 9: 1102–1109.
Aita VM, Liang XH, Murty VV, Pincus DL, Yu W, Cayanis E et al. Cloning and genomic organization of beclin 1, a candidate tumor suppressor gene on chromosome 17q21. Genomics 1999; 59: 59–65.
Yue Z, Jin S, Yang C, Levine AJ, Heintz N . Beclin 1, an autophagy gene essential for early embryonic development, is a haploinsufficient tumor suppressor. Proc Natl Acad Sci USA 2003; 100: 15077–15082.
Galluzzi L, Vicencio JM, Kepp O, Tasdemir E, Maiuri MC, Kroemer G . To die or not to die: that is the autophagic question. Curr Mol Med 2008; 8: 78–91.
Galluzzi L, Maiuri MC, Vitale I, Zischka H, Castedo M, Zitvogel L et al. Cell death modalities: classification and pathophysiological implications. Cell Death Differ 2007; 14: 1237–1243.
Kroemer G, Galluzzi L, Vandenabeele P, Abrams J, Alnemri ES, Baehrecke EH et al. Classification of cell death: recommendations of the Nomenclature Committee on Cell Death 2009. Cell Death Differ 2009; 16: 3–11.
Levine B, Sinha S, Kroemer G . Bcl-2 family members: dual regulators of apoptosis and autophagy. Autophagy 2008; 4: 600–606.
Maiuri MC, Zalckvar E, Kimchi A, Kroemer G . Self-eating and self-killing: crosstalk between autophagy and apoptosis. Nat Rev Mol Cell Biol 2007; 8: 741–752.
Pattingre S, Tassa A, Qu X, Garuti R, Liang XH, Mizushima N et al. Bcl-2 antiapoptotic proteins inhibit Beclin 1-dependent autophagy. Cell 2005; 122: 927–939.
Maiuri MC, Le Toumelin G, Criollo A, Rain JC, Gautier F, Juin P et al. Functional and physical interaction between Bcl-X(L) and a BH3-like domain in Beclin-1. EMBO J 2007; 26: 2527–2539.
Wei Y, Pattingre S, Sinha S, Bassik M, Levine B . JNK1-mediated phosphorylation of Bcl-2 regulates starvation-induced autophagy. Mol Cell 2008; 30: 678–688.
Sarkar S, Floto RA, Berger Z, Imarisio S, Cordenier A, Pasco M et al. Lithium induces autophagy by inhibiting inositol monophosphatase. J Cell Biol 2005; 170: 1101–1111.
Williams A, Sarkar S, Cuddon P, Ttofi EK, Saiki S, Siddiqi FH et al. Novel targets for Huntington's disease in an mTOR-independent autophagy pathway. Nat Chem Biol 2008; 4: 295–305.
Gordon PB, Holen I, Fosse M, Rotnes JS, Seglen PO . Dependence of hepatocytic autophagy on intracellularly sequestered calcium. J Biol Chem 1993; 268: 26107–26112.
Brady NR, Hamacher-Brady A, Yuan H, Gottlieb RA . The autophagic response to nutrient deprivation in the hl-1 cardiac myocyte is modulated by Bcl-2 and sarco/endoplasmic reticulum calcium stores. FEBS J 2007; 274: 3184–3197.
Gao W, Ding WX, Stolz DB, Yin XM . Induction of macroautophagy by exogenously introduced calcium. Autophagy 2008; 4: 754–761.
Hoyer-Hansen M, Bastholm L, Szyniarowski P, Campanella M, Szabadkai G, Farkas T et al. Control of macroautophagy by calcium, calmodulin-dependent kinase kinase-beta, and Bcl-2. Mol Cell 2007; 25: 193–205.
Berridge MJ, Bootman MD, Roderick HL . Calcium signalling: dynamics, homeostasis and remodelling. Nat Rev Mol Cell Biol 2003; 4: 517–529.
Szabadkai G, Bianchi K, Varnai P, De Stefani D, Wieckowski MR, Cavagna D et al. Chaperone-mediated coupling of endoplasmic reticulum and mitochondrial Ca2+ channels. J Cell Biol 2006; 175: 901–911.
Szabadkai G, Rizzuto R . Participation of endoplasmic reticulum and mitochondrial calcium handling in apoptosis: more than just neighborhood? FEBS Lett 2004; 567: 111–115.
Berridge MJ . The endoplasmic reticulum: a multifunctional signaling organelle. Cell Calcium 2002; 32: 235–249.
Rong Y, Distelhorst CW . Bcl-2 protein family members: versatile regulators of calcium signaling in cell survival and apoptosis. Annu Rev Physiol 2008; 70: 73–91.
Kroemer G, Galluzzi L, Brenner C . Mitochondrial membrane permeabilization in cell death. Physiol Rev 2007; 87: 99–163.
Criollo A, Maiuri MC, Tasdemir E, Vitale I, Fiebig AA, Andrews D et al. Regulation of autophagy by the inositol trisphosphate receptor. Cell Death Differ 2007; 14: 1029–1039.
Criollo A, Vicencio JM, Tasdemir E, Maiuri MC, Lavandero S, Kroemer G . The inositol trisphosphate receptor in the control of autophagy. Autophagy 2007; 3: 350–353.
Lam D, Golstein P . A specific pathway inducing autophagic cell death is marked by an IP3R mutation. Autophagy 2008; 4: 349–350.
Lam D, Kosta A, Luciani MF, Golstein P . The Inositol 1,4,5-Trisphosphate Receptor Is Required to Signal Autophagic Cell Death. Mol Biol Cell 2008; 19: 691–700.
Klionsky DJ, Abeliovich H, Agostinis P, Agrawal DK, Aliev G, Askew DS et al. Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes. Autophagy 2008; 4: 151–175.
Mizushima N, Yoshimori T . How to interpret LC3 immunoblotting. Autophagy 2007; 3: 542–545.
Mikoshiba K . IP3 receptor/Ca2+ channel: from discovery to new signaling concepts. J Neurochem 2007; 102: 1426–1446.
Mikoshiba K . The IP3 receptor/Ca2+ channel and its cellular function. Biochem Soc Symp 2007: 74: 9–22.
Varnai P, Balla A, Hunyady L, Balla T . Targeted expression of the inositol 1,4,5-triphosphate receptor (IP3R) ligand-binding domain releases Ca2+ via endogenous IP3R channels. Proc Natl Acad Sci USA 2005; 102: 7859–7864.
Jaimovich E, Mattei C, Liberona JL, Cardenas C, Estrada M, Barbier J et al. Xestospongin B, a competitive inhibitor of IP3-mediated Ca2+ signalling in cultured rat myotubes, isolated myonuclei, and neuroblastoma (NG108-15) cells. FEBS Lett 2005; 579: 2051–2057.
Gafni J, Munsch JA, Lam TH, Catlin MC, Costa LG, Molinski TF et al. Xestospongins: potent membrane permeable blockers of the inositol 1,4,5-trisphosphate receptor. Neuron 1997; 19: 723–733.
Guillemette J, Caron AZ, Regimbald-Dumas Y, Arguin G, Mignery GA, Boulay G et al. Expression of a truncated form of inositol 1,4,5-trisphosphate receptor type III in the cytosol of DT40 triple inositol 1,4,5-trisphosphate receptor-knockout cells. Cell Calcium 2005; 37: 97–104.
Devogelaere B, Verbert L, Parys JB, Missiaen L, De Smedt H . The complex regulatory function of the ligand-binding domain of the inositol 1,4,5-trisphosphate receptor. Cell Calcium 2008; 43: 17–27.
Quirion JC, Sevenet T, Husson HP, Weniger B, Debitus C . Two new alkaloids from Xestospongia sp., a New Caledonian sponge. J Nat Prod 1992; 55: 1505–1508.
Grynkiewicz G, Poenie M, Tsien RY . A new generation of Ca2+ indicators with greatly improved fluorescence properties. J Biol Chem 1985; 260: 3440–3450.
Chiesa A, Rapizzi E, Tosello V, Pinton P, de Virgilio M, Fogarty KE et al. Recombinant aequorin and green fluorescent protein as valuable tools in the study of cell signalling. Biochem J 2001; 355: 1–12.
Palmer AE, Jin C, Reed JC, Tsien RY . Bcl-2-mediated alterations in endoplasmic reticulum Ca2+ analyzed with an improved genetically encoded fluorescent sensor. Proc Natl Acad Sci USA 2004; 101: 17404–17409.
Gonzalez-Polo RA, Boya P, Pauleau AL, Jalil A, Larochette N, Souquere S et al. The apoptosis/autophagy paradox: autophagic vacuolization before apoptotic death. J Cell Sci 2005; 118: 3091–3102.
Criollo A, Galluzzi L, Maiuri MC, Tasdemir E, Lavandero S, Kroemer G . Mitochondrial control of cell death induced by hyperosmotic stress. Apoptosis 2007; 12: 3–18.
Boya P, Gonzalez-Polo RA, Casares N, Perfettini JL, Dessen P, Larochette N et al. Inhibition of macroautophagy triggers apoptosis. Mol Cell Biol 2005; 25: 1025–1040.
Jiang M, Milner J . Bcl-2 constitutively suppresses p53-dependent apoptosis in colorectal cancer cells. Genes Dev 2003; 17: 832–837.
Harborth J, Elbashir SM, Bechert K, Tuschl T, Weber K . Identification of essential genes in cultured mammalian cells using small interfering RNAs. J Cell Sci 2001; 114: 4557–4565.
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T et al. LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing. EMBO J 2000; 19: 5720–5728.
Lin X, Varnai P, Csordas G, Balla A, Nagai T, Miyawaki A et al. Control of calcium signal propagation to the mitochondria by inositol 1,4,5-trisphosphate-binding proteins. J Biol Chem 2005; 280: 12820–12832.
Acknowledgements
GK is supported by the Ligue Nationale contre le Cancer (équipe labellisée), European Commission (RIGHT, ChemoRes, Apop-Train, Apo-SYs), Agence Nationale pour la Recherche, Cancéropôle Ile-de-France and Institut National contre le Cancer (INCa). We thank the International Collaboration Program ECOS-CONICYT, project C08S01. JMV is supported by Fondation pour la Recherche Médicale and CONICYT. CO holds a PhD scholarship from CONICYT, Chile. OK is supported by EMBO. AWEJ is a Medical Research Council student. We also thank Michael R Duchen (University College London) for the use of confocal facility (Zeiss LSM 510 Meta) and discussions, as well as to Dr. Roger Y Tsien (University of California at San Diego) for the donation of ERD1.
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Vicencio, J., Ortiz, C., Criollo, A. et al. The inositol 1,4,5-trisphosphate receptor regulates autophagy through its interaction with Beclin 1. Cell Death Differ 16, 1006–1017 (2009). https://doi.org/10.1038/cdd.2009.34
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DOI: https://doi.org/10.1038/cdd.2009.34
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