Abstract
Although bacteria are ubiquitous in the near-surface atmosphere and they can have important effects on human health, airborne bacteria have received relatively little attention and their spatial dynamics remain poorly understood. Owing to differences in meteorological conditions and the potential sources of airborne bacteria, we would expect the atmosphere over different land-use types to harbor distinct bacterial communities. To test this hypothesis, we sampled the near-surface atmosphere above three distinct land-use types (agricultural fields, suburban areas and forests) across northern Colorado, USA, sampling five sites per land-use type. Microbial abundances were stable across land-use types, with ∼105–106 bacterial cells per m3 of air, but the concentrations of biological ice nuclei, determined using a droplet freezing assay, were on average two and eight times higher in samples from agricultural areas than in the other two land-use types. Likewise, the composition of the airborne bacterial communities, assessed via bar-coded pyrosequencing, was significantly related to land-use type and these differences were likely driven by shifts in the sources of bacteria to the atmosphere across the land-uses, not local meteorological conditions. A meta-analysis of previously published data shows that atmospheric bacterial communities differ from those in potential source environments (leaf surfaces and soils), and we demonstrate that we may be able to use this information to determine the relative inputs of bacteria from these source environments to the atmosphere. This work furthers our understanding of bacterial diversity in the atmosphere, the terrestrial controls on this diversity and potential approaches for source tracking of airborne bacteria.
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Acknowledgements
We would like to thank Donna Berg-Lyons for her assistance with the pyrosequencing preparation, Jesse Stombaugh for his assistance with the bioinformantics, Dr Ray Fall for providing access to the equipment used for the ice nucleation assays, and Dr John Basey for providing us with access to a fluorescent microscope. We would also like to thank members of the Fierer lab for their helpful input on this paper. This study was supported by grants to N.F. from the Cooperative Institute for Research in Environmental Sciences, the National Science Foundation and the U.S. Department of Agriculture.
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Bowers, R., McLetchie, S., Knight, R. et al. Spatial variability in airborne bacterial communities across land-use types and their relationship to the bacterial communities of potential source environments. ISME J 5, 601–612 (2011). https://doi.org/10.1038/ismej.2010.167
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DOI: https://doi.org/10.1038/ismej.2010.167
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