Abstract
Schizophrenia (SCZ) is a complex psychiatric disorder that is strongly influenced by a genetic component. Recent studies suggested that histone deacetylases (HDACs) might increase the expression of several key genes in the brain and may also be associated with susceptibility to SCZ. Among human HDACs, HDAC2 is a critical modulator of gene regulation. Here, we designed a two-stage case–control study to thoroughly examine the association between the HDAC2 gene and SCZ. A total of 19 common single-nucleotide polymorphisms (SNPs) in the region of the HDAC2 gene were analyzed in the test group of 1430 patients and 2862 matched healthy controls. A comparison of the genotype and allele frequencies of the SNPs between cases and controls revealed that three SNPs, rs13212283, rs6568819 and rs9488289, were nominally associated with SCZ. However, we failed to observe any association between these SNPs and SCZ in the validation group consisting of 896 cases and 1815 matched healthy controls. Furthermore, haplotypic analysis also confirmed the negative results. Our results provide preliminary evidence that HDAC2 may not confer susceptibility to SCZ in Han Chinese. Additional genetic studies from a large population are required to obtain more conclusive results.
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References
Perälä, J., Suvisaari, J., Saarni, S. I., Kuoppasalmi, K., Isometsä, E., Pirkola, S. et al. Lifetime prevalence of psychotic and bipolar I disorders in a general population. Arch Gen Psychiatry. 64, 19–28 (2007).
Do, K. Q. Schizophrenia: genes, environment and neurodevelopment. Rev. Med. Suisse 9, 1674–1677 (2013).
Hosak, L. New findings in the genetics of schizophrenia. World J. Psychiatry 3, 57–61 (2013).
McGrath, J. J., Mortensen, P. B., Visscher, P. M. & Wray, N. R. Where GWAS and epidemiology meet: opportunities for the simultaneous study of genetic and environmental risk factors in schizophrenia. Schizophr. Bull. 39, 955–959 (2013).
Corvin, A. Schizophrenia at a genetics crossroads: where to now? Schizophr. Bull. 39, 490–495 (2013).
O'Donovan, M. C., Craddock, N., Norton, N., Williams, H., Peirce, T., Moskvina, V. et al. Identification of loci associated with schizophrenia by genome-wide association and follow-up. Nat. Genet. 40, 1053–1055 (2008).
Guan, F., Zhang, C., Wei, S., Zhang, H., Gong, X., Feng, J. et al. Association of PDE4B polymorphisms and schizophrenia in Northwestern Han Chinese. Hum. Genet. 131, 1047–1056 (2012).
Guan, F., Zhang, B., Yan, T., Li, L., Liu, F., Li, T. et al. MIR137 gene and target gene CACNA1C of miR-137 contribute to schizophrenia susceptibility in Han Chinese. Schizophr. Res. 152, 97–104 (2014).
Guan, F., Wei, S., Zhang, C., Zhang, H., Zhang, B., Xing, B. et al. A population-based association study of 2q32.3 and 8q21.3 loci with schizophrenia in Han Chinese. J. Psychiatr. Res. 47, 712–717 (2013).
Guan, F., Wei, S., Feng, J., Zhang, C., Xing, B., Zhang, H. et al. Association study of a new schizophrenia susceptibility locus of 10q24.32-33 in a Han Chinese population. Schizophr. Res. 138, 63–68 (2012).
Singh, S., Kumar, A., Agarwal, S., Phadke, S. R. & Jaiswal, Y. Genetic insight of schizophrenia: past and future perspectives. Gene 535, 97–100 (2014).
Ma, L., Tang, J., Wang, D., Zhang, W., Liu, W., Wang, D. et al. Evaluating risk loci for schizophrenia distilled from genome-wide association studies in Han Chinese from Central China. Mol. Psychiatry. 18, 638–639 (2013).
Petronis, A. The origin of schizophrenia: genetic thesis, epigenetic antithesis, and resolving synthesis. Biol. Psychiatry. 55, 965–970 (2004).
Mill, J., Tang, T., Kaminsky, Z., Khare, T., Yazdanpanah, S., Bouchard, L. et al. Epigenomic profiling reveals DNA-methylation changes associated with major psychosis. Am. J. Hum. Genet. 82, 696–711 (2008).
Kinoshita, M., Numata, S., Tajima, A., Shimodera, S., Ono, S., Imamura, A. et al. DNA methylation signatures of peripheral leukocytes in schizophrenia. Neuromol. Med. 15, 95–101 (2013).
Cheng, J., Wang, Y., Zhou, K., Wang, L., Li, J., Zhuang, Q. et al. Male-specific association between dopamine receptor D4 gene methylation and schizophrenia. PloS ONE 9, e89128 (2014).
Minucci, S. & Pelicci, P. G. Histone deacetylase inhibitors and the promise of epigenetic (and more) treatments for cancer. Nat. Rev. Cancer. 6, 38–51 (2006).
Kim, D., Frank, C. L., Dobbin, M. M., Tsunemoto, R. K., Tu, W., Peng, P. L. et al. Deregulation of HDAC1 by p25/Cdk5 in neurotoxicity. Neuron 60, 803–817 (2008).
Tremolizzo, L., Carboni, G., Ruzicka, W. B., Mitchell, C. P., Sugaya, I., Tueting, P. et al. An epigenetic mouse model for molecular and behavioral neuropathologies related to schizophrenia vulnerability. Proc. Natl Acad. Sci. USA 99, 17095–17100 (2002).
Parker, K., Maxson, J., Mooney, A. & Wiley, E. A. Class I histone deacetylase Thd1p promotes global chromatin condensation in Tetrahymena thermophila. Eukaryot. Cell. 6, 1913–1924 (2007).
Han, H., Yu, Y., Shi, J., Yao, Y., Li, W., Kong, N. et al. Associations of histone deacetylase-2 and histone deacetylase-3 genes with schizophrenia in a Chinese population. Asia Pac. Psychiatry 5, 11–16 (2013).
Schaid, D. J., Rowland, C. M., Tines, D. E., Jacobson, R. M. & Poland, G. A. Score tests for association between traits and haplotypes when linkage phase is ambiguous. Am. J. Hum. Genet. 70, 425–434 (2002).
Gabriel, S. B., Schaffner, S. F., Nguyen, H., Moore, J. M., Roy, J. & Blumenstiel, B. et al. The structure of haplotype blocks in the human genome. Science 296, 2225–2229 (2002).
Barrett, J. C., Fry, B., Maller, J. & Daly, M. J. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21, 263–265 (2005).
Barrett, R. M. & Wood, M. A. Beyond transcription factors: the role of chromatin modifying enzymes in regulating transcription required for memory. Learn. Mem. 15, 460–467 (2008).
Morris, M. J., Karra, A. S. & Monteggia, L. M. Histone deacetylases govern cellular mechanisms underlying behavioral and synaptic plasticity in the developing and adult brain. Behav. Pharmacol. 21, 409–419 (2010).
Monsey, M. S., Ota, K. T., Akingbade, I. F., Hong, E. S. & Schafe, G. E. Epigenetic alterations are critical for fear memory consolidation and synaptic plasticity in the lateral amygdala. PloS ONE 6, e19958 (2011).
Montgomery, R. L., Hsieh, J., Barbosa, A. C., Richardson, J. A. & Olson, E. N. Histone deacetylases 1 and 2 control the progression of neural precursors to neurons during brain development. Proc. Natl Acad. Sci. USA 106, 7876–7881 (2009).
Kim, M. S., Akhtar, M. W., Adachi, M., Mahgoub, M., Bassel-Duby, R., Kavalali, E. T. et al. An essential role for histone deacetylase 4 in synaptic plasticity and memory formation. J. Neurosci. 32, 10879–10886 (2012).
Chen, Y., Sharma, R. P., Costa, R. H., Costa, E. & Grayson, D. R. On the epigenetic regulation of the human reelin promoter. Nucleic Acids Res. 30, 2930–2939 (2002).
Hyman, S. E. Target practice: HDAC inhibitors for schizophrenia. Nat. Neurosci. 15, 1180–1181 (2012).
Acknowledgements
This research was totally supported by and National Natural Science Foundation of China (no. 81401563), China Postdoctoral Science Foundation Funded Project (nos. T70927 and M532029), PhD Programs Foundation of Ministry of Education of China (no. 2013021120078) and Fundamental Research Funds for the Central Universities (nos. 08142024 and 08143003). The funding sources had no role in the design of this study, the collection, analysis and interpretation of data, the writing of the report or the decision to submit the paper for publication.
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Chen, G., Guan, F., Lin, H. et al. Genetic analysis of common variants in the HDAC2 gene with schizophrenia susceptibility in Han Chinese. J Hum Genet 60, 479–484 (2015). https://doi.org/10.1038/jhg.2015.66
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DOI: https://doi.org/10.1038/jhg.2015.66
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