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Imaging of Rab5 activity identifies essential regulators for phagosome maturation

Abstract

Efficient phagocytosis of apoptotic cells is crucial for tissue homeostasis and the immune response1,2. Rab5 is known as a key regulator of the early endocytic pathway3 and we have recently shown that Rab5 is also implicated in apoptotic cell engulfment4; however, the precise spatio-temporal dynamics of Rab5 activity remain unknown. Here, using a newly developed fluorescence resonance energy transfer biosensor, we describe a change in Rab5 activity during the engulfment of apoptotic thymocytes. Rab5 activity on phagosome membranes began to increase on disassembly of the actin coat encapsulating phagosomes. Rab5 activation was either continuous or repetitive for up to 10 min, but it ended before the collapse of engulfed apoptotic cells. Expression of a dominant-negative mutant of Rab5 delayed this collapse of apoptotic thymocytes, showing a role for Rab5 in phagosome maturation. Disruption of microtubules with nocodazole inhibited Rab5 activation on the phagosome membrane without perturbing the engulfment of apoptotic cells. Furthermore, we found that Gapex-5 is the guanine nucleotide exchange factor essential for Rab5 activation during the engulfment of apoptotic cells. Gapex-5 was bound to a microtubule-tip-associating protein, EB1, whose depletion inhibited Rab5 activation during phagocytosis. We therefore propose a mechanistic model in which the recruitment of Gapex-5 to phagosomes through the microtubule network induces the transient Rab5 activation.

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Figure 1: Transient Rab5 activation during phagocytosis monitored by Raichu-Rab5.
Figure 2: Time sequence of actin and Rab5 accumulation, Rab5 activation, and breakdown of apoptotic thymocytes.
Figure 3: Involvement of microtubules and Gapex-5 in Rab5 activation at engulfment sites.

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Acknowledgements

We thank N. Yoshida, N. Fujimoto, A. Nishiyama, K. Fukuhara, Y. Kasakawa for technical assistance; I. Lodhi and A. Saltiel for unpublished information on Gapex-5; Y. Kiyosue for advice on EB1; and members of the Matsuda laboratory for their input. This work was supported by grants from the Ministry of Education, Culture, Sports, Science, and Technology of Japan.

Author Contributions M.K. and M.N. performed the experimental work and data analysis. T.N., S.N. and M.M. wrote the paper. All authors discussed the results and commented on the manuscript.

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Correspondence to Takeshi Nakamura.

Supplementary information

Supplementary Information

This file contains Supplementary Methods, Supplementary Video Legends, and Supplementary Figures 1-8 and Legends. (PDF 3758 kb)

Supplementary Video

This file contains Supplementary Movie 1 which shows Rab5 activation during engulfment monitored by Raichu-Rab5. (MPG 4398 kb)

Supplementary Video

This file contains Supplementary Movie 2 which shows Rab5 activation during engulfment monitored by Raichu-Rab5/K-RasCT. (MPG 4398 kb)

Supplementary Video

This file contains Supplementary Movie 3 which shows Repetitive Rab5 activation at the engulfment site . (MPG 4398 kb)

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Kitano, M., Nakaya, M., Nakamura, T. et al. Imaging of Rab5 activity identifies essential regulators for phagosome maturation. Nature 453, 241–245 (2008). https://doi.org/10.1038/nature06857

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