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Mutations in SLC6A19, encoding B0AT1, cause Hartnup disorder

Abstract

Hartnup disorder, an autosomal recessive defect named after an English family described in 1956 (ref. 1), results from impaired transport of neutral amino acids across epithelial cells in renal proximal tubules and intestinal mucosa. Symptoms include transient manifestations of pellagra (rashes), cerebellar ataxia and psychosis1,2. Using homozygosity mapping in the original family in whom Hartnup disorder was discovered, we confirmed that the critical region for one causative gene was located on chromosome 5p15 (ref. 3). This region is homologous to the area of mouse chromosome 13 that encodes the sodium-dependent amino acid transporter B0AT1 (ref. 4). We isolated the human homolog of B0AT1, called SLC6A19, and determined its size and molecular organization. We then identified mutations in SLC6A19 in members of the original family in whom Hartnup disorder was discovered and of three Japanese families. The protein product of SLC6A19, the Hartnup transporter, is expressed primarily in intestine and renal proximal tubule and functions as a neutral amino acid transporter.

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Figure 1: Families with Hartnup disorder and topology of B0AT1 and its mutations.
Figure 2: Expression of B0AT1 and Slc6a18 in mouse tissues and human tissue expression profile for the Hartnup transporter SLC6A19 (encoding B0AT1).
Figure 3: Function of SLC6A19 (encoding B0AT1).

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References

  1. Baron, D.N., Dent, C.E., Harris, H., Hart, E.W. & Jepson, J.B. Hereditary pellagra-like skin rash with temporary cerebellar ataxia, constant renal amino-aciduria, and other bizarre biochemical features. Lancet 271, 421–428 (1956).

    Article  CAS  PubMed  Google Scholar 

  2. Levy, H.L. Hartnup disorder. in The Metabolic and Molecular Bases of Inherited Disease 8th edn., vol. III (eds. Scriver, C.R., Beaudet, A.L., Valle, D.L. & Sly, W.S.) 4957–4969 (McGraw-Hill, New York, 2001).

    Google Scholar 

  3. Nozaki, J. et al. Homozygosity mapping to chromosome 5p15 of a gene responsible for Hartnup disorder. Biochem. Biophys. Res. Commun. 284, 255–260 (2001).

    Article  CAS  PubMed  Google Scholar 

  4. Broer, A. et al. Molecular cloning of mouse amino acid transport system B0, a neutral amino acid transporter related to Hartnup disorder. J. Biol. Chem. 279, 24467–24476 (2004).

    Article  CAS  PubMed  Google Scholar 

  5. Bernardini, I., Introne, W., Kleta, R., Fitzpatrick, D.L. & Gahl, W.A. Detection of Hartnup's disorder in an alkaptonuria sibship. Am. J. Hum. Genet. 69, Suppl. 1, 1784 (2001).

    Google Scholar 

  6. Virlon, B. et al. Serial microanalysis of renal transcriptomes. Proc. Natl. Acad. Sci. USA 96, 15286–15291 (1999).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Shih, V.E., Bixby, E.M., Alpers, D.H., Bartsocas, C.S. & Thier, S.O. Studies of intestinal transport defect in Hartnup disease. Gastroenterology 61, 445–453 (1971).

    CAS  PubMed  Google Scholar 

  8. Verrey, F. et al. CATs and HATs: the SLC7 family of amino acid transporters. Pflugers Arch. 447, 532–542 (2004).

    Article  CAS  PubMed  Google Scholar 

  9. Palacin, M., Goodyer, P., Nunes, V., Gasparini & Cystinuria, P. in The Metabolic and Molecular Bases of Inherited Disease 8th edn., vol. III (eds. Scriver, C.R., Beaudet, A.L., Valle, D.L. & Sly, W.S.) 4909–4932 (McGraw-Hill, New York, 2001).

    Google Scholar 

  10. Kleta, R., Stuart, C., Gill, F.A. & Gahl, W.A. Renal glucosuria due to SGLT2 mutations. Mol. Genet. Metab. 82, 56–58 (2004).

    Article  CAS  PubMed  Google Scholar 

  11. Seow, H.F. et al. Hartnup disorder is caused by mutations in SLC6A19, encoding the neutral amino acid transporter. Nat. Genet. advance online publication, 1 August 2004 (doi:10.1038/ng′).

  12. Lander, E.S. & Botstein, D. Homozygosity mapping: a way to map human recessive traits with the DNA of inbred children. Science 236, 1567–1570 (1987).

    Article  CAS  PubMed  Google Scholar 

  13. Kruglyak, L., Daly, M.J. & Lander, E.S. Rapid multipoint linkage analysis of recessive traits in nuclear families, including homozygosity mapping. Am. J. Hum. Genet. 56, 519–527 (1995).

    CAS  PubMed  PubMed Central  Google Scholar 

  14. Cottingham, R.W. Jr., Idury, R.M. & Schaffer, A.A. Faster sequential genetic linkage computations. Am. J. Hum. Genet. 53, 252–263 (1993).

    PubMed  PubMed Central  Google Scholar 

  15. Schafer, J.A. et al. A simplified method for isolation of large numbers of defined nephron segments. Am. J. Physiol. 273, F650–F657 (1997).

    CAS  PubMed  Google Scholar 

  16. Levy, D.I., Velazques, H., Goldstein, S.A. & Bockenhauer, D. Segment-specific expression of 2P domain potassium channel genes in human nephron. Kidney Int. 65, 918–926 (2004).

    Article  CAS  PubMed  Google Scholar 

  17. Kanai, Y. & Hediger, M.A. Primary structure and functional characterization of a high-affinity glutamate transporter. Nature 360, 467–471 (1992).

    Article  CAS  PubMed  Google Scholar 

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Acknowledgements

We thank D. Bacic for help with frozen sections, L.G. Palacio for statistical analyses, F. Skovby for expert advice and the families who graciously participated in this study. This study was supported by Grants-in-aid from the Japanese Government to A.K. and by Swiss National Science Foundation grants to F.V.

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Correspondence to Robert Kleta.

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Kleta, R., Romeo, E., Ristic, Z. et al. Mutations in SLC6A19, encoding B0AT1, cause Hartnup disorder. Nat Genet 36, 999–1002 (2004). https://doi.org/10.1038/ng1405

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