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In-Vivo Lipidomics using Single-Cell Raman Spectroscopy
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  • Published: 10 May 2010

In-Vivo Lipidomics using Single-Cell Raman Spectroscopy

  • Huawen Wu1,
  • Joanne Volponi2,
  • Ann Oliver3,
  • Atul Parikh3,
  • Blake Simmons4 &
  • …
  • Seema Singh1 

Nature Precedings (2010)Cite this article

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Abstract

We describe a method for direct, quantitative, in vivo lipid profiling of oil producing microalgae using single-cell laser-trapping Raman spectroscopy (LTRS). This approach is demonstrated in the quantitative determination of the degree of unsaturation and transition temperatures of constituent lipids within microalgae. These properties are important markers for determining engine compatibility and performance metrics of algal biodiesel. We show that these factors can be directly measured from a single living microalgal cell held in place with an optical trap while simultaneously collecting Raman data. Cellular response to different growth conditions is monitored in real time. Our approach circumvents the need for lipid extraction and analysis that is both slow and invasive. Furthermore, this technique yields real-time chemical information in a label-free manner, thus eliminating the limitations of impermeability, toxicity and specificity of the fluorescent probes used in other common protocols. Although the single-cell Raman spectroscopy demonstrated here is focused on the study of the microalgal lipids with biofuel applications, the analytical capability and quantitation algorithms demonstrated are applicable to many different organisms, and should prove useful for a diverse range of applications in lipidomics.

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Authors and Affiliations

  1. Sandia National Laboratories, Biomass Science and Conversion Technologies Department https://www.nature.com/nature

    Huawen Wu & Seema Singh

  2. Sandia National Laboratories https://www.nature.com/nature

    Joanne Volponi

  3. University of California Davis, Deaprtment of Applied Sciences https://www.nature.com/nature

    Ann Oliver & Atul Parikh

  4. Andia National Laboratories, Biofuels and Biomaterials Science and Technology https://www.nature.com/nature

    Blake Simmons

Authors
  1. Huawen Wu
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  2. Joanne Volponi
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  3. Ann Oliver
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  4. Atul Parikh
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  5. Blake Simmons
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  6. Seema Singh
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Corresponding author

Correspondence to Seema Singh.

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Wu, H., Volponi, J., Oliver, A. et al. In-Vivo Lipidomics using Single-Cell Raman Spectroscopy. Nat Prec (2010). https://doi.org/10.1038/npre.2010.4428.1

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  • Received: 08 May 2010

  • Accepted: 10 May 2010

  • Published: 10 May 2010

  • DOI: https://doi.org/10.1038/npre.2010.4428.1

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Keywords

  • lipidomics
  • biofuel
  • microalgae
  • raman
  • LTRS
  • lipid trigger
  • Lipid
  • TAG
  • Oleoabundance
  • biodiesel
  • carotenoid
  • single cell
  • in-vivo technique
  • laser trap
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