Table 3 Transcription factor binding sites (TFBS) that were significantly differentially methylated in the whole blood of guinea pig and human neonates following ACS.

From: Identification of a DNA methylation signature in whole blood of newborn guinea pigs and human neonates following antenatal betamethasone exposure

Transcription factor

Guinea pig

Human

PLAGL1

454 sites, 80 genes

104 DMCs, 26 genes

Cellular response to stimulus

Gene transcription

Signal transduction

 

Response to chemical

 

Cell communication

 

TFAP2C

356 DMCs, 71 genes

49 DMCs, 17 genes

Cell differentiation

No gene sets identified

Cell proliferation

 

Transcription regulation

 

Cell motiliy

 

EGR1

313 sites, 63 genes

136 DMCs, 26 genes

Transcription

No gene sets identified

Cellular biosynthetic process

 

Signalling

 

Response to stimulus

 

Cell communication

 

ZNF263

213 DMCs, 50 genes

84 DMCs, 26 genes

Transcription regulation activity

No gene sets identified

Protein kinase binding

 

Calcium-dependent protein serine/threonine kinase activity

 

Cell motility

 

Cell migration

 

Cellular response to stimulus

 

SP1

84 sites, 55 genes

82 DMCs, 23 genes

Regulation of cell population and proliferation

RNA polymerase II-specific DNA-binding transcription factor binding

Cell differentiation

Positive regulation of proteolysis

Cell migration

Myeloid cell differentiation

Cell motility

Membrane-bounded organelle

Signal transduction

 
  1. Transcription factors whose binding sites were differentially methylated in the blood of PND1 guinea pigs and human neonates are indicated in the table below. The number of differentially methylated sites that were within TFBS and the number of annotated genes are indicated in bold. Terms identified through gene set enrichment analysis using the annotated genes are indicated for each transcription factor.