Table 1 Top 10 SNPs contributed to each A-DCCA model.
CHR | BP | SNP | A1 | Saliency score | Gene | Biological process |
|---|---|---|---|---|---|---|
Top 10 genetic contributors to AA-DCCA | ||||||
22 | 45724727 | rs6007592 | A | 0.95967615 | FAM118A | Protein binding |
22 | 38581503 | rs4821754 | C | 0.81379056 | PLA2G6 | Intracellular Membrane-Associated Calcium-Independent |
2 | 100109001 | rs6715321 | C | 0.7096488 | REV1 | DNA biosynthetic process |
10 | 12762476 | rs723210 | C | 0.6532598 | CAMK1D | Apoptotic process/regulation of dendrite development |
11 | 28498509 | rs10835345 | C | 0.65170395 | METTL15 | Apoptotic process/rRNA base methylation |
17 | 12005251 | rs11078050 | A | 0.6466721 | MAP2K4 | Positive regulation of neuron apoptotic process |
4 | 112228994 | rs6822712 | C | 0.6425801 | Intergenic | NA |
1 | 67186429 | rs17129381 | C | 0.6179403 | SGIP1 | Endocytosis |
17 | 12018851 | rs76321211 | C | 0.61320865 | MAP2K4 | Positive regulation of neuron apoptotic process |
11 | 28434177 | rs7111039 | C | 0.59354526 | METTL15 | Apoptotic process/rRNA base methylation |
Top 10 genetic contributors to SA-DCCA | ||||||
6 | 112149373 | rs9384810 | C | 8.071861 | FYN | Neuron migration/Synapse |
1 | 44249916 | rs917293 | A | 7.428208 | ST3GAL3 | Ganglioside biosynthetic process via lactosylceramide |
5 | 82371910 | rs1993947 | A | 7.083643 | TMEM167A | Protein secretion |
9 | 96352243 | rs10992792 | C | 6.3167377 | PHF2 | Zinc ion bindind |
1 | 44249485 | rs917294 | A | 6.0538197 | ST3GAL3 | Ganglioside biosynthetic process via lactosylceramide |
6 | 28299687 | rs853676 | C | 5.521865 | ZSCAN31 | Metal ion binding |
9 | 96358301 | rs10821168 | C | 5.354203 | PHF2 | Zinc ion bindind |
5 | 82363068 | rs144860721 | C | 5.352993 | TMEM167A | Protein secretion |
11 | 44626461 | rs4755851 | C | 5.296435 | CD82 | Protein binding |