Fig. 3: SAA inhibits LCMV CEN activity through competing substrate. | Acta Pharmacologica Sinica

Fig. 3: SAA inhibits LCMV CEN activity through competing substrate.

From: Salvianolic acid A from Salvia miltiorrhiza identified as a cap-dependent endonuclease inhibitor for pathogenic arenaviruses

Fig. 3

a The inhibitory effect of SAA on the cleavage of LCMV CEN on ssRNA substrate was examined at 5, 10, and 20 min via acrylamide-urea gel electrophoresis. Gray analysis of the corresponding strips was calculated for the inhibition rate, shown in the right panel. The divalent metal ion chelator, EDTA, was used as a positive control. The representative image was derived from three replicate experiments. b Dose-dependent inhibitory effect of SAA on LCMV CEN activity was detected using fluorescence resonance energy transfer (FRET), and an IC50 was calculated based on the fluorescent signal value. Baloxavir (BXA) was used as a control. Data were from three independent experiments. c Enzymatic reaction rate was determined by adding different concentrations of LCMV CEN (left) to the reaction system while maintaining a constant substrate concentration, or adding different concentrations of substrate (right) to the reaction system in the presence of 1 µM of LCMV CEN. SAA was used as 5, 10, and 20 µM. Data were from three independent experiments. d Affinity of SAA to LCMV CEN was measured using surface plasmon resonance (SPR); KD was calculated and is shown in the fitted curves. Data were from once representative experiment. e Interaction between SAA and LCMV CEN was analyzed by docking. SAA is shown in green, the blue sticks indicate amino acids interacting with SAA, and the Mn2+ is shown in purple. f Molecular dynamics simulations of SAA with LCMV CEN at 100 ns.

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