Table 1 Contiguity statistics of the iyXylViol4.1 assembly at four stages of the assembly pipeline.

From: The genome sequence of the Violet Carpenter Bee, Xylocopa violacea (Linnaeus, 1785): a hymenopteran species undergoing range expansion

Assembly

Processing

n

n:500

L50

Min size (Bases)

N75 (Bases)

N50 (Bases)

N25 (Mb)

Max Size (Mb)

Sum Size (Gb)

Contig

None

1224

1224

54

6217

2,713,785

5,907,526

11.39

25.68

1.082

Contam removed, Mito removed

984

984

50

6530

3,024,594

5,963,704

11.73

25.68

1.02

Scaffold

None

1343

1343

41

1000

2,669,000

6,651,566

15.08

39.23

1.02

Manual Curation

1300

1300

19

1000

2,735,000

11,420,000

31.82

71.42

1.02

  1. Statistics generated using abyss-fac (Jackman et al. 2017). Contam = Contigs identified as contaminant, see main text, Mito = putative mitochondrial contigs, identified using MitoHifi (Uliano-Silva et al. 2023), see main text.
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