Fig. 2: Composition of eukaryotic RNA and proteins. | Nature Communications

Fig. 2: Composition of eukaryotic RNA and proteins.

From: Microeukaryote metabolism across the western North Atlantic Ocean revealed through autonomous underwater profiling

Fig. 2

Relative abundance of transcript reads assigned to open reading frame (ORF) predicted proteins (a), and exclusive proteomic spectral counts assigned to ORFs (b) within the eukaryotes. Each row represents a station and depth (“7_700” = St. 7700 m). Only microeukaryote transcripts having a EUKulele taxonomic annotation are shown. Reads associated with unannotated ORFs are not shown. Note that 30 m and 115 m surface samples at BATS (St. 1) were collected using McLane pumps instead of Clio, with separate 0.2–3 μm (“0.2”) and 3–51 μm (“3”) filter fractions. NA represent microbes with lineage-conflicted taxonomic assignments and are unable to be classified at the eukaryotic supergroup level. c The relative abundance of taxonomically annotated eukaryotic ORFs contained in the translated metatranscriptome database is displayed as a single stacked barplot.

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