Fig. 2: Growth of strain PD1T on carbohydrates and expression of CAZymes.
a F. sacchari growth on carbohydrates, lignocellulosic biomass, and casamino acids versus no-carbon source control (n = 3 experimental replicates; Welch’s one-tailed t-test, *p < 0.05; **p < 0.001). Bars represent the mean. Error bars represent 95% confidence intervals. Sugar mix, 0.005% m v-1 each of D-glucose/D-ribose/D-xylose; AFEX, ammonia fiber expansion. No corrections were applied for multiple statistical tests because each growth experiment had its own negative controls. b Rank-abundance plot of putative GHs based on mean mRNA abundance following growth on eight different polysaccharides (n = 3 experimental replicates). GHs present in the culture G-10 metaproteome, multi-domain GHs, and expressed GHs are highlighted. c NMDS based on F. sacchari RNA-Seq data with PD1T grown on eight different polysaccharides (n = 3 experimental replicates; global one-way ANOSIM p < 0.001). d NMDS based on only CAZymes from the same RNA-Seq data (n = 3 experimental replicates; global one-way ANOSIM p < 0.001). Source data for the figure panels and p values for panel a are provided as Source Data files.
