Table 1 STR expansions observed in GRID2

From: Polygenic burden of short tandem repeat expansions promotes risk for Alzheimer’s disease

chromosome

STR start position

STR end position

motif

reference tract length

expansion tract length

case/control status

chr4

92329993

92330025

AG

16

82

case

chr4

92329993

92330025

AG

16

80

case

chr4

92466830

92466842

TG

6

75

case

chr4

92599053

92599069

TC

8

32

control

chr4

92617863

92617878

TGT

5

20

case

chr4

92688027

92688039

CTT

4

51

case

chr4

92931623

92931643

AC

10

39

case

chr4

92931623

92931643

AC

10

75

case

  1. Genomic coordinates, number of repeats in reference genome (reference tract length), and motif are shown based on GRCh38 reference genome for each STR expansion identified by DBSCAN. The tract length of the expansion and whether it was seen in a case or control individual is also listed.
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