Fig. 3: Exact sequence variants assigned to Ichthyobodo. | Nature Communications

Fig. 3: Exact sequence variants assigned to Ichthyobodo.

From: Parasite sedimentary DNA reveals fish introduction into a European high-mountain lake by the seventh century

Fig. 3

A Sequence alignment indicates the consensus sequence and the variants ordered by their supporting bootstrap assignment in the references databases, which is shown following the ESV label and taxonomic assignment. B Neighbor-joining tree74, depicting the similarity between the sequences. Values within the circles indicate the bootstrapping support of the branch; >70% can be considered good, and 50–70% moderate77. C Distribution of reads for each ESV along the sediment core. The changing color indicates the bootstrap confidence of the taxonomic assignment to Ichthyobodo; the lighter, the higher. ESV894 was the most common in four-weekly sediment trap samples during 2017–2018, and six other ESVs were also found (ESV957, ESV2118, ESV487, ESV7556, ESV516, ESV2505). Source data can be found in NCBI GenBank ref. OR539619-OR539672.

Back to article page