Fig. 7: Comparative analysis of synteny and gene families. | Nature Communications

Fig. 7: Comparative analysis of synteny and gene families.

From: The unexplored diversity of rough-seeded lupins provides rich genomic resources and insights into lupin evolution

Fig. 7

a Distribution of Ks scores calculated from the coding sequences of orthologous genes from the six comparisons. The Ks values are shown on the x-axis, and their density is on the y-axis. b UpSet plot comparing the shared gene families (orthogroups) among the four lupin species. The histogram displays the number of gene families shared by the genomes indicated below the x-axis. The histogram is sorted by the number of shared families in each possible combination of the four genomes. c A phylogenetic tree constructed for the four lupin species using the STAG method in OrthoFinder. The values indicate the branch lengths. The scale bar represents the number of differences between the sequences. Source data are provided as a Source Data file.

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