Fig. 7: Genetic features of SDV from the Var.GWAS dataset. | Nature Communications

Fig. 7: Genetic features of SDV from the Var.GWAS dataset.

From: Functional impact of splicing variants in the elaboration of complex traits in cattle

Fig. 7

Scatter plots of a │∆PSI│ values or b prediction scores versus ALT allele frequency. Note that Pangolin scores are represented in absolute values to allow comparison with SpliceAI scores. c Proportion of QTL containing at least one SDV identified in Vex-seq (QTL + ). The number of QTL+ containing more than 1 SDV is detailed on the right. d Based on experimental observations restricted to Vex-seq regions, an estimate of the proportion of QTL+ regions was made for the whole genome (see main text for details). Source data are provided as a Source Data file.

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