Table 1 Influenza viruses, including bovine A(H5N1) 2.3.4.4b viruses used in this study
Influenza A virus | Subtype | HA clade | Abbreviation | Genotypea | Accession Number |
|---|---|---|---|---|---|
Reference CVV | |||||
A/Astrakhan/3212/2020 | H5N8 | 2.3.4.4b | Astrakhan/3212 | NAb | EPI_ISL_1038924 |
A/chicken/Ghana/AVL-76321VIR7050-39/2021 | H5N1 | 2.3.4.4b | ck/Ghana/39 | NA | EPI_ISL_15350905 |
A/American wigeon/South Carolina/22-000345-001/2021 | H5N1 | 2.3.4.4b | wigeon/SC/345 | A1 | OQ958041-OQ958048 |
A/bald eagle/Florida/W22-134-OP/2022 | H5N1 | 2.3.4.4b | eagle/FL/W22 | B1.1 | OP377436-OP377443 |
A/gyrfalcon/Washington/41088-6/2014 | H5N8 | 2.3.4.4c | gyrfalcon/41088 | NA | EPI_ISL_173878 |
Bovine and avian influenza viruses | |||||
A/bovine/Ohio/B24OSU-302/2024 | H5N1 | 2.3.4.4b | bovine/OH/302 | B3.13 | PP836396-PP836403 |
A/bovine/Ohio/B24OSU-342/2024 | H5N1 | 2.3.4.4b | bovine/OH/342 | B3.13 | PP836412-PP836419 |
A/bovine/Ohio/B24OSU-358/2024 | H5N1 | 2.3.4.4b | bovine/OH/358 | B3.13 | PP836428-PP836435 |
A/bovine/Ohio/B24OSU-368/2024 | H5N1 | 2.3.4.4b | bovine/OH/368 | B3.13 | PV837962-PV837969 |
A/bovine/Ohio/B24OSU-432/2024 | H5N1 | 2.3.4.4b | bovine/OH/432 | B3.13 | PP836460-PP836467 |
A/bovine/Ohio/B24OSU-439/2024 | H5N1 | 2.3.4.4b | bovine/OH/439 | B3.13 | PP836468-PP836475 |
A/bovine/Ohio/B24OSU-497/2024 | H5N1 | 2.3.4.4b | bovine/OH/497 | B3.13 | PP836516-PP836523 |
A/bovine/Ohio/B24OSU-541/2024 | H5N1 | 2.3.4.4b | bovine/OH/541 | B3.13 | PQ249609-PQ249616 |
A/bovine/Texas/3301/2024 | H5N1 | 2.3.4.4b | bovine/TX/3301 | B3.13 | PV839246-PV839253 |
A/bovine/Texas/38161/2024 | H5N1 | 2.3.4.4b | bovine/TX/38161 | B3.13 | PV839254-PV839261 |
A/bovine/Texas/40106/2024 | H5N1 | 2.3.4.4b | bovine/TX/40106 | B3.13 | PV839262-PV839269 |
A/bovine/Texas/42041/2024 | H5N1 | 2.3.4.4b | bovine/TX/42041 | B3.13 | PV839270-PV839277 |
A/bovine/Texas/43134/2024 | H5N1 | 2.3.4.4b | bovine/TX/43134 | B3.13 | PV839278-PV839285 |
A/bovine/Texas/97794/2024 | H5N1 | 2.3.4.4b | bovine/TX/97794 | B3.13 | PV839286-PV839293 |
A/bovine/Texas/98638/2024 | H5N1 | 2.3.4.4b | bovine/TX/98638 | B3.13 | PV839294-PV839301 |
A/Ross’s goose/Kansas/W23-930F/2023 | H5N1 | 2.3.4.4b | goose/KS/930F | Minor60 | PP576920-PP576927 |
A/snow goose/Louisiana/W23-957/2023 | H5N1 | 2.3.4.4b | goose/LA/957 | B3.7 | PV837936-PV837943 |
Human influenza virus | |||||
A/California/04/2009 | H1N1pdm09 | NA | CA/09 | NA | EPI_ISL_29573 |
