Fig. 3: Variation between RPE-1 haplotypes.
From: The reference genome of the human diploid cell line RPE-1
Karyoplot showing SNP density (blue line) across the RPE1v1.1 Hap1 genome, calculated in non-overlapping 10 kb windows, with SNPs identified by comparing Hap1 (reference) to Hap2 (query) with SyRI. Highly diverged regions (HDRs) detected by SyRI are shown as grey bars, and the positions of live higher-order repeats (HORs) are marked with underlying black boxes.
