Fig. 2: Molecular phylogeny of Th. intermedium and R. kamoji.

a Maximum-likelihood phylogeny of Triticeae species constructed using whole-genome shared SNPs. Branch support values displayed at nodes represent 1000 standard bootstrap replicates. Evolutionary nodes annotated with red ellipses indicate divergence times and 95% Highest Posterior Density Intervals. b Whole-genome mappings among closely related diploid species, Th. intermedium, and R. kamoji. Xa: H. marinum; V: D. villosum; St: Pse. libanotica; D: Ae. tauschii; E: Th. elongatum; Thin: Th. intermedium; Rka: R. kamoji. c Synteny analysis among Th. intermedium, R. kamoji, and closely related diploid species. Blue lines indicate the 4V-5V-7V translocation events among V-clade species; red lines indicate inversion events; gray lines represent synteny blocks. d Inferred speciation of Th. intermedium and R. kamoji.