Table 2 List of the significant (p < 0.05) differentially expressed genes (DEGs) associated with AS, and their respective fold changes identified among pairwise comparisons of control mice (CK), high-fat diet (M) mice subjected to high dose of plasmalogens (PLH), low dose of plasmalogens (PLL), and atorvastatin (ATV) supplementation
Gene name | Description | Fold changes of DAMs | |||
---|---|---|---|---|---|
M/CK | PLL/M | PLH/M | AG/M | ||
Arachidonic acid metabolism | |||||
Acox2d | Acyl-Coenzyme A oxidase 2 | 4.85 | 0.98 | 0.49 | 0.52 |
Alox12b | Arachidonate 12-lipoxygenase 12 R type | 202.62 | 0.80 | 0.03 | 0.01 |
Alox12ec | Arachidonate lipoxygenase, epidermal | 11.55 | 0.28 | 0.18 | 0.53 |
Cbr2 | Carbonyl reductase 2 | 20.24 | 0.79 | 0.19 | 0.41 |
Cyp4a12bc,d | Cytochrome P450, family 4, subfamily a, polypeptide 12B | 4.98 | 0.75 | 0.43 | 0.32 |
Hpgds | Hematopoietic prostaglandin D synthase | 0.80 | 1.13 | 1.45 | 3.63 |
Pla2g4f c | Phospholipase A2, group IID | 32.27 | 1.15 | 0.01 | 0.41 |
Ptgs2 | Prostaglandin-endoperoxide synthase 2 | 1.39 | 0.91 | 0.26 | 0.26 |
Fluid shear stress and atherosclerosis/lipid and atherosclerosisa | |||||
Calml3c | Calmodulin-like 3 | 10.93 | 0.97 | 0.10 | 0.12 |
Calm4c | Calmodulin 4 | 239.53 | 0.48 | 0.00 | 0.12 |
Ccl3 | Chemokine (C-C motif) ligand 3 | 2.77 | 1.17 | 0.05 | 0.07 |
Cd14 | CD14 antigen | 4.89 | 0.68 | 0.25 | 0.39 |
Cyp2j12 | Cytochrome P450, family 2, subfamily j, polypeptide 12 | 20.57 | 0.00 | 0.39 | 0.00 |
Fosb,c | FBJ osteosarcoma oncogene | 2.95 | 0.21 | 0.06 | 0.07 |
Hsp90aa15 | Heat shock protein 90, alpha, class A 1 | 3.04 | 0.80 | 0.52 | 0.71 |
Il1αb | Interleukin 1 alpha | 4.94 | 1.04 | 0.13 | 1.34 |
Il1r2c | Interleukin 1 receptor, type II | 17.42 | 1.23 | 0.12 | 0.30 |
Junb | Jun proto-oncogene | 1.38 | 0.69 | 0.46 | 0.43 |
Mapk13b,c | Mitogen-activated protein kinase 13 | 3.63 | 0.80 | 0.08 | 0.17 |
Mapk15 | Mitogen-activated protein kinase 15 | 80.21 | 0.92 | 0.11 | 0.46 |
Pou2f3 | POU domain, class 2, transcription factor 3 | 7.07 | 0.64 | 0.27 | 0.27 |
Sdc1 | Syndecan 1 | 4.34 | 1.00 | 0.29 | 0.53 |
Tnfb,c | Tumor necrosis factor | 2.07 | 1.07 | 0.17 | 0.24 |
Adipocytokine/MAPK/PI3K-Akt signaling pathwayb | |||||
Cacng1 | Calcium channel, voltage-dependent, gamma 1 | 104.53 | 0.17 | 0.26 | 0.42 |
Creb3l3c | cAMP responsive element binding protein 3-like 3 | 1.98 | 0.47 | 0.00 | 0.14 |
Efna3 | Ephrin A3 | 5.09 | 0.94 | 0.05 | 0.13 |
Fgf6 | Fibroblast growth factor 6 | 54.49 | 0.10 | 1.54 | 1.80 |
Npy | Neuropeptide Y | 34.51 | 0.06 | 0.06 | 0.00 |
Npy5r | Neuropeptide Y receptor Y5 | 2.80 | 0.00 | 0.00 | 0.00 |
Ntf5 | Neurotrophin 5 | 29.08 | 0.67 | 0.36 | 0.96 |
Ntrk1c | Neurotrophic tyrosine kinase, receptor, type 1 | 59.11 | 0.03 | 0.87 | 0.34 |
Cytokine-cytokine receptor interaction/ NOD-like receptor signaling pathwayc | |||||
Casp1 | Caspase 1 | 2.35 | 0.77 | 0.45 | 1.37 |
Casp4 | Caspase 4 | 2.00 | 0.77 | 0.55 | 1.24 |
Casr | Calcium-sensing receptor | 26.17 | 0.08 | 0.62 | 0.44 |
Ccl20 | Chemokine (C-C motif) ligand 20 | 17.75 | 0.41 | 0.18 | 0.20 |
Cxcl5 | Chemokine (C-X-C motif) ligand 5 | 21.28 | 1.06 | 0.24 | 0.35 |
Il1f8 | Interleukin 1 family, member 8 | 26.44 | 1.07 | 0.00 | 0.10 |
Il18r1 | Interleukin 18 receptor 1 | 6.49 | 1.31 | 0.37 | 1.73 |
Il1rl2 | Interleukin 1 receptor-like 2 | 4.51 | 1.00 | 0.26 | 0.44 |
Lif | Leukemia inhibitory factor | 7.30 | 0.43 | 0.14 | 0.28 |
Panx1 | Pannexin 1 | 3.96 | 0.51 | 0.61 | 1.74 |
Bile acid/Cholesterol/Fat metabolismd | |||||
Apoa1 | Apolipoprotein A-I | 0.02 | 3.30 | 2.32 | 10.33 |
Apoe | Apolipoprotein E | 0.03 | 0.93 | 1.41 | 1.17 |
Cel | Carboxyl ester lipase | 1.73 | 0.00 | 0.00 | 0.00 |
Clps | Colipase, pancreatic | 1.34 | 0.47 | 0.15 | 0.11 |
Nceh1 | Neutral cholesterol ester hydrolase 1 | 0.83 | 1.22 | 3.34 | 2.66 |
Pnlip | Pancreatic lipase | 1.25 | 0.00 | 0.00 | 0.00 |
Pnliprp1 | Pancreatic lipase related protein 1 | 2.61 | 0.34 | 0.00 | 0.22 |
Slc27a5 | Solute carrier family 27 (fatty acid transporter), member 5 | 0.18 | 2.49 | 2.63 | 3.06 |
Others | |||||
Aldh3a1 | Aldehyde dehydrogenase 3A1 | 109.20 | 1.00 | 0.09 | 0.13 |
Edn3 | Endothelin 3 | 14.78 | 0.13 | 0.63 | 0.22 |
Ffar1 | Free fatty acid receptor 1 | 0.17 | 8.53 | 12.05 | 420.48 |
Nos1 | Nitric oxide synthase 1, neuronal | 44.17 | 0.17 | 0.33 | 0.94 |
Prkag3 | Protein kinase, AMP-activated, gamma 3 | 22.54 | 0.27 | 0.34 | 0.45 |
Sult2b1 | Sulfotransferase family, cytosolic 2B1 | 10.13 | 0.61 | 0.07 | 0.14 |