Table 2 List of the significant (p < 0.05) differentially expressed genes (DEGs) associated with AS, and their respective fold changes identified among pairwise comparisons of control mice (CK), high-fat diet (M) mice subjected to high dose of plasmalogens (PLH), low dose of plasmalogens (PLL), and atorvastatin (ATV) supplementation

From: Effects of Mytilus edulis derived plasmalogens against atherosclerosis via lipid metabolism and MAPK signaling pathway

Gene name

Description

Fold changes of DAMs

M/CK

PLL/M

PLH/M

AG/M

Arachidonic acid metabolism

Acox2d

Acyl-Coenzyme A oxidase 2

4.85

0.98

0.49

0.52

Alox12b

Arachidonate 12-lipoxygenase 12 R type

202.62

0.80

0.03

0.01

Alox12ec

Arachidonate lipoxygenase, epidermal

11.55

0.28

0.18

0.53

Cbr2

Carbonyl reductase 2

20.24

0.79

0.19

0.41

 Cyp4a12bc,d

Cytochrome P450, family 4, subfamily a, polypeptide 12B

4.98

0.75

0.43

0.32

Hpgds

Hematopoietic prostaglandin D synthase

0.80

1.13

1.45

3.63

Pla2g4f c

Phospholipase A2, group IID

32.27

1.15

0.01

0.41

Ptgs2

Prostaglandin-endoperoxide synthase 2

1.39

0.91

0.26

0.26

Fluid shear stress and atherosclerosis/lipid and atherosclerosisa

Calml3c

Calmodulin-like 3

10.93

0.97

0.10

0.12

Calm4c

Calmodulin 4

239.53

0.48

0.00

0.12

Ccl3

Chemokine (C-C motif) ligand 3

2.77

1.17

0.05

0.07

Cd14

CD14 antigen

4.89

0.68

0.25

0.39

Cyp2j12

Cytochrome P450, family 2, subfamily j, polypeptide 12

20.57

0.00

0.39

0.00

Fosb,c

FBJ osteosarcoma oncogene

2.95

0.21

0.06

0.07

Hsp90aa15

Heat shock protein 90, alpha, class A 1

3.04

0.80

0.52

0.71

Il1αb

Interleukin 1 alpha

4.94

1.04

0.13

1.34

Il1r2c

Interleukin 1 receptor, type II

17.42

1.23

0.12

0.30

Junb

Jun proto-oncogene

1.38

0.69

0.46

0.43

Mapk13b,c

Mitogen-activated protein kinase 13

3.63

0.80

0.08

0.17

Mapk15

Mitogen-activated protein kinase 15

80.21

0.92

0.11

0.46

Pou2f3

POU domain, class 2, transcription factor 3

7.07

0.64

0.27

0.27

Sdc1

Syndecan 1

4.34

1.00

0.29

0.53

Tnfb,c

Tumor necrosis factor

2.07

1.07

0.17

0.24

Adipocytokine/MAPK/PI3K-Akt signaling pathwayb

Cacng1

Calcium channel, voltage-dependent, gamma 1

104.53

0.17

0.26

0.42

Creb3l3c

cAMP responsive element binding protein 3-like 3

1.98

0.47

0.00

0.14

Efna3

Ephrin A3

5.09

0.94

0.05

0.13

Fgf6

Fibroblast growth factor 6

54.49

0.10

1.54

1.80

Npy

Neuropeptide Y

34.51

0.06

0.06

0.00

Npy5r

Neuropeptide Y receptor Y5

2.80

0.00

0.00

0.00

Ntf5

Neurotrophin 5

29.08

0.67

0.36

0.96

Ntrk1c

Neurotrophic tyrosine kinase, receptor, type 1

59.11

0.03

0.87

0.34

Cytokine-cytokine receptor interaction/ NOD-like receptor signaling pathwayc

Casp1

Caspase 1

2.35

0.77

0.45

1.37

Casp4

Caspase 4

2.00

0.77

0.55

1.24

Casr

Calcium-sensing receptor

26.17

0.08

0.62

0.44

Ccl20

Chemokine (C-C motif) ligand 20

17.75

0.41

0.18

0.20

Cxcl5

Chemokine (C-X-C motif) ligand 5

21.28

1.06

0.24

0.35

Il1f8

Interleukin 1 family, member 8

26.44

1.07

0.00

0.10

Il18r1

Interleukin 18 receptor 1

6.49

1.31

0.37

1.73

Il1rl2

Interleukin 1 receptor-like 2

4.51

1.00

0.26

0.44

Lif

Leukemia inhibitory factor

7.30

0.43

0.14

0.28

Panx1

Pannexin 1

3.96

0.51

0.61

1.74

Bile acid/Cholesterol/Fat metabolismd

Apoa1

Apolipoprotein A-I

0.02

3.30

2.32

10.33

Apoe

Apolipoprotein E

0.03

0.93

1.41

1.17

Cel

Carboxyl ester lipase

1.73

0.00

0.00

0.00

Clps

Colipase, pancreatic

1.34

0.47

0.15

0.11

Nceh1

Neutral cholesterol ester hydrolase 1

0.83

1.22

3.34

2.66

Pnlip

Pancreatic lipase

1.25

0.00

0.00

0.00

Pnliprp1

Pancreatic lipase related protein 1

2.61

0.34

0.00

0.22

Slc27a5

Solute carrier family 27 (fatty acid transporter), member 5

0.18

2.49

2.63

3.06

Others

Aldh3a1

Aldehyde dehydrogenase 3A1

109.20

1.00

0.09

0.13

Edn3

Endothelin 3

14.78

0.13

0.63

0.22

Ffar1

Free fatty acid receptor 1

0.17

8.53

12.05

420.48

Nos1

Nitric oxide synthase 1, neuronal

44.17

0.17

0.33

0.94

Prkag3

Protein kinase, AMP-activated, gamma 3

22.54

0.27

0.34

0.45

Sult2b1

Sulfotransferase family, cytosolic 2B1

10.13

0.61

0.07

0.14

  1. a indicates that it is also involved in fluid shear stress and atherosclerosis/lipid and atherosclerosis.
  2. b indicates that it is also involved in adipocytokine/MAPK signaling pathway/PI3K-Akt signaling pathway.
  3. c indicates that it also participates in cytokine-cytokine receptor interaction/ NOD-like receptor signaling pathway.
  4. d indicates that it also participates in bile acid/cholesterol/fat metabolism.