Fig. 5: Analysis of merged SE regions in LUAD cases from the National Cancer Center dataset. | npj Systems Biology and Applications

Fig. 5: Analysis of merged SE regions in LUAD cases from the National Cancer Center dataset.

From: SEgene identifies links between super enhancers and gene expression across cell types

Fig. 5

a Graphical representation of ranked merged SEs, highlighting the clustering of SEs across multiple samples. Several SE regions along the rank axis (X-axis) exhibit substantial overlap, reflected as elevated SE counts (Y-axis), indicating genomic loci of potential significance. b Stacked read plot providing a detailed visualization of the merged SE region at chr17:39,508,684–39,870,304, illustrating the dense aggregation of SEs within this genomic locus across multiple samples.

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