Fig. 6: Correlation analysis of the merged SE region at chr17:39,508,684–39,870,304 and ERBB2 neighboring genes in LUAD from the National Cancer Center Japan cohort.
From: SEgene identifies links between super enhancers and gene expression across cell types
Genes identified by P2GL as having significant Pearson correlation coefficients with SE peaks are displayed. The X-axis represents log10-transformed TPM values, while the Y-axis represents log10-transformed CPM values. The figure shows gene-specific Pearson correlation coefficients for SEs within the merged SE region: (a) MIEN1, (b) STARD3, (c) GRB7, (d) MIR4728, (e) AC087491.1, and (f) PGAP3. This visualization underscores the strength of the associations between the merged SE region and the expression levels of each gene.
