Extended Data Table 1 Global summary of genome assemblies for six bats

From: Comparative genomics provides insights into chromosomal evolution and immunological adaptation in horseshoe bats

Species

R. sinicus

R. affinis*

R. pearsonii

H. armiger

H. pratti

M. lyra

Karyotype (2n)

36

62

44

32

32

54

Genome size (Gb)

2.06

2.09

2.08

2.12

2.13

2.02

Contig N50 (Mb)

45.68

31.54

41

52.97

58.05

25.26

Contig Number

104

587

176

265

271

883

Scaffold N50 (Mb)

182.9

93.07

172.78

174.32

175.14

94.71

Anchoring onto chromosomes (%)

99.95

99.67

99.63

99.74

99.97

99.88

Gene Number

22,650

21,220

21,211

22,249

21,669

21,986

Average intron length per gene (bp)

4,307

4,167

4,011

4,378

4,235

3,572

Repeat ratio (%)

31.19

31.41

31.98

34.73

34.51

32

Quality Value (QV)

42.68

41.98

42.37

42.39

42.48

41.43

Complete BUSCOs (%)

95.7

95.4

95.6

94.5

94.3

95.4

  1. Note: * indicates R. affinis assembly have been published in GenBank (Accession Number: JAUKPG000000000).
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