Extended Data Fig. 2: Genome analyses and gene family studies in the orchid mantis.
From: The pigment transporter Redboy confers programmed body colour transition in orchid mantises
a, Chromosomes of Hymenopus coronatus in the testis cell from sixth-instar nymphs. Twenty-one chromosomes (2n = 42) present at spermatogonial metaphase. b, Genome-wide contact matrix from Hi-C data between all chromosomes. c, Venn plot of gene functional annotation in five databases of the orchid mantis. d, Genomic landscapes of H. coronatus. Denotation of each track listed on the left bottom of the circos plot. e, Genome size analyses of various insects from different orders. Each dot represents one species. f, Phylogeny and subfamily identification of ABC transporters from H. coronatus, D. melanogaster, and B. mori. g, Phylogenetic tree using representative ABCGpt sequences. Divergence times of each subtype and proteins calculated and shown as thick orange lines. h, Chromosomal localization of ABCG transporter genes in the orchid mantis. i, Detailed gene structure of White, Scarlet, Brown, and Redboy in the orchid mantis showing exon arrangement. j, Volcano plot represents the Log2 fold change (N2D0/N1D3) for each gene expression and the corresponding Log10 (p-value). Up-regulated ABCG pigment transporter genes labeled with red dots and black font, P values were calculated from 3 biological replicates using two-tailed Student t-test. Source data are provided in Source Data Extended Data Fig. 2.
