Extended Data Fig. 6: SHAPE-MaP analysis achieved high accuracy and reliability.
From: Amino acid changes in two viral proteins drive attenuation of the yellow fever 17D vaccine

a, Scatter plots of genome-wide SHAPE reactivities between two independent probing experiments. R2, the square of the Pearson correlation coefficient. b, The cHP structure is located in the coding region of the capsid gene. 3′ UTR DB and sHP-3′SL are located at the end of the 3′ UTR. Nucleotides are colored by SHAPE reactivity (see scale). cHP, capsid hairpin; 3’-UTR DB, 3′ untranslated region dumbbell; sHP-3′SL, short hairpin and 3′ stem-loop.